Rhodococcus sp. 008: AOT96_22840
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Entry
AOT96_22840 CDS
T05462
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOT96_22840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_22840
Enzymes [BR:
rhod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AOT96_22840
DNA repair and recombination proteins [BR:
rhod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOT96_22840
Prokaryotic type
AOT96_22840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANQ73365
LinkDB
All DBs
Position
4902893..4903564
Genome browser
AA seq
223 aa
AA seq
DB search
MAPLAEIVDPGWARALEPVSEQITAMGKFLREEIAAGREYLPAGENVLRAFTNPFEDVRV
LIVGQDPYPTPGHAVGLSFSVAPDVRPVPRSLGNIYKEYHQDLGLPIPPNGDLTPWSKQG
VLLLNRVLTVQPGQAASHRKKGWEPVTEQAIRALVARSSPMVAILWGRDAATLAPMLGDT
PIIESAHPSPLSASRGFFGSRPFSRANELLTGLGADPVDWNLG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcttgcagagatcgtcgacccagggtgggcgcgagcactcgaaccggtgtcg
gagcagatcaccgcgatgggtaagttcttgcgcgaagagatcgctgcgggacgggagtac
ctgccggcgggggagaacgtcttgcgtgcgttcacgaaccctttcgaggacgttcgagtg
ctcatcgtcggtcaggacccttatccgacgcccggtcacgctgtcgggttgagcttttcg
gttgcaccggacgtgcggccggttccgcgaagtctcggcaacatctacaaggagtatcac
caggatctcgggttgccgataccgccgaacggcgatctgacaccgtggtcgaaacaaggt
gtgctgcttctcaatcgcgttctcaccgtgcagccgggtcaagccgcttctcatcgtaag
aagggctgggagccggtgaccgagcaggctatccgcgctctggtcgcgcggtcgtcgccg
atggtggcgatcttgtggggtcgtgacgcggccactctcgcgccgatgctcggcgacaca
ccgatcatcgaatccgcgcacccgtcaccgctttcggcctcgcgtggcttcttcggttcg
cgccccttcagtcgtgcgaacgaactcttgaccggactcggagccgatccggtcgactgg
aatctgggctga
DBGET
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