Rhodococcus sp. 008: AOT96_24400
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Entry
AOT96_24400 CDS
T05462
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
rhod
Rhodococcus sp. 008
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AOT96_24400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhod03021
]
AOT96_24400
Transcription machinery [BR:
rhod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOT96_24400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Extensin_1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ANQ73625
LinkDB
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Position
complement(5240823..5242181)
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AA seq
452 aa
AA seq
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MAATDTRQTADSPSESEPQSPAVEAATVTAPAAKKAPAKKAPAKKAAAKKAPAKKAPAKK
AAAKKASPKKAGDPDAEDGDVELEDIDITDGDLAEVESDVVEVVAVGEDEETAAEPSEKD
KASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAG
LYAVQIMQDLADKGEKLPAAQRRDMSWICRDGNRAKNHLLEANLRLVVSLAKRYTGRGMA
FLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVI
NKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLG
DFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVY
GVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaccgatacacgtcagactgctgattctccatcagagtcagagccacaatct
ccagccgtggaggcggccaccgtcaccgctccggcagccaagaaggctccggcgaaaaag
gcccccgccaagaaggcagcagcaaagaaggctccggccaagaaagctccggccaagaag
gcagcagctaagaaggccagccctaagaaggccggcgatcctgacgccgaagacggcgat
gtcgagttggaagacatcgacatcacggacggcgaccttgccgaggtcgagtccgatgtc
gtcgaggtcgtagcagtcggcgaagacgaagagaccgctgcagagccgtccgagaaggac
aaggcttccggcgacttcgtctgggacgaggaagagtccgaggctctccgtcaggcacgc
aaggatgccgaactgacggcgtccgccgactcggttcgcgcttacctcaagcagatcggc
aaggtcgcactcctcaacgccgaagaggaagtcgaactggccaagcgcatcgaggccggc
ctctacgccgtgcagatcatgcaggacctcgctgacaagggcgagaagttgcctgcggct
cagcgacgcgacatgagctggatctgccgcgacggcaaccgcgccaagaaccacctcctc
gaggccaacctccgcctggtcgtctcgctggccaagcgctacacgggccgcggcatggcg
ttcctggacctcatccaggaaggcaacctcggtctgatccgtgcagtcgagaagttcgac
tacaccaagggttacaagttctcgacctacgccacgtggtggatccgtcaggccatcacc
cgcgcaatggccgaccaggctcgcaccatccgtatcccggtgcacatggtcgaggtcatc
aacaagctcggccgtatccagcgtgagctgctccaggacctgggccgtgagcccacgccg
gaagagctcgccaaggaaatggacatcacgccggagaaggtgctggaaatccagcagtac
gcgcgtgagccgatctctctcgaccagaccatcggcgacgagggcgacagccagctcggt
gacttcatcgaggactccgaagctgttgtcgcagtcgatgccgtctcgttcaccttgctg
caggatcagctgcagtcggtactcgagacgctgtccgagcgcgaagccggcgtggttcgc
ctccgcttcggtctcaccgacggtcagccgaggactttagacgaaatcggacaggtctac
ggcgtcacgcgtgagcgtatccgccagatcgaatcgaagacgatgtcgaagctgcgccac
ccgtcgcgttcgcaggttctgcgcgactacctcgactag
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