KEGG   Rhodococcus sp. 008: AOT96_24540
Entry
AOT96_24540       CDS       T05462                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rhod  Rhodococcus sp. 008
Brite
KEGG Orthology (KO) [BR:rhod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhod03016]
    AOT96_24540
Enzymes [BR:rhod01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AOT96_24540
Transfer RNA biogenesis [BR:rhod03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AOT96_24540
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ANQ73650
LinkDB
Position
complement(5271123..5272412)
AA seq 429 aa
MSEVTDDATEPTSDVVPLLVPRDGVPDVITTAAGVADAAAALASGHGPLAVDAERASGFR
YSARAYLIQLRREGAGSFLLDPIPTAQDLQPLAEVINPLQWVLHSADQDLPGLAELGLTP
AELFDTELAGRLAGFERVGLAAIVERTLRVELRKGHGAADWSTRPLPDAWLNYAALDVEV
LLELRDAMEAELESQGKLEWAKEEFEYIRLAGPPKPKPDRWRRTSHITSLKTTRQLAAVR
ALWQAREDLARKRDVSPSRVLPDSAIIDAALKDPRSLDALRSLPVFGGPRQRRYSRIWMD
ALEAARRLPDSELPPKTPPIVGPPAAGRWARQDPAAADRLTAARAALSDLSKEVSVPVEN
LLQPDLVRRLCWDWKLEPDSDIAEVESAIETKLTSGGARGWQRTLTVPVLAEALNSVVPA
EPEVEEPES
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtccgaagtcaccgatgatgcaaccgagcccacctccgacgtagttccgctgctcgtt
ccgcgtgacggagttccggacgtcatcaccactgccgccggtgtcgccgacgccgcggcc
gcgctggcctccggccacggcccgctcgccgtggacgccgagcgcgcatccggattccgc
tattcggcacgggcgtacctgatccagcttcgacgcgaaggagcaggatcgttcctgctc
gacccgattccgacagcgcaagacctgcagccgttggccgaggtgatcaacccgttgcaa
tgggtgctgcactctgccgatcaggatctccccggcctcgccgaactgggcctgacgccg
gccgagctgttcgacaccgaactggccggacgactggccgggttcgagcgagtcggactc
gccgcgatcgtggaacgaaccctgcgagtggaacttcgcaagggtcacggggctgcggac
tggtcgacacgtccgctgccggacgcctggttgaactacgccgccctcgacgtcgaagtg
cttctcgaactgcgcgacgcaatggaagccgaactcgaatcccaaggcaagctcgagtgg
gcgaaggaagagttcgagtacatccgtctggccggcccgcccaagcccaaaccggaccgc
tggcgtcgtacgtcgcacatcacctcactcaagaccacccgtcagttggcggcggtacgg
gcgctgtggcaagcgcgcgaggatctcgcacgcaagcgcgacgtgtctccgagtcgggtt
cttcctgactccgcgatcatcgatgccgctctcaaagatcctcggtcgctggatgcgctc
cgctcgcttcccgtcttcggcggaccacgtcaacgccgttattcgcgtatctggatggac
gcactggaagccgcgcgcaggctccccgacagcgagcttccgccgaaaaccccgcccatc
gtcgggccgcccgctgccggccgctgggcccgccaggatccagcggcggctgatcggttg
accgcggcgcgcgcagcactgtcggacctgagcaaagaggtttcggtgcccgtggagaat
ctgctccaacccgacctggtcaggcgcctgtgctgggactggaaactggaacccgactcg
gacatcgccgaagtcgagagtgcgatcgagaccaagctcacttccggtggcgcacgtggc
tggcaacgcactttgaccgttcccgtcctcgccgaggcactgaactccgtggtcccggcc
gagcccgaagtggaagagccggaatcctga

DBGET integrated database retrieval system