Rhodococcus sp. 008: AOT96_24540
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Entry
AOT96_24540 CDS
T05462
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rhod
Rhodococcus sp. 008
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhod03016
]
AOT96_24540
Enzymes [BR:
rhod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AOT96_24540
Transfer RNA biogenesis [BR:
rhod03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AOT96_24540
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Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANQ73650
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Position
complement(5271123..5272412)
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AA seq
429 aa
AA seq
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MSEVTDDATEPTSDVVPLLVPRDGVPDVITTAAGVADAAAALASGHGPLAVDAERASGFR
YSARAYLIQLRREGAGSFLLDPIPTAQDLQPLAEVINPLQWVLHSADQDLPGLAELGLTP
AELFDTELAGRLAGFERVGLAAIVERTLRVELRKGHGAADWSTRPLPDAWLNYAALDVEV
LLELRDAMEAELESQGKLEWAKEEFEYIRLAGPPKPKPDRWRRTSHITSLKTTRQLAAVR
ALWQAREDLARKRDVSPSRVLPDSAIIDAALKDPRSLDALRSLPVFGGPRQRRYSRIWMD
ALEAARRLPDSELPPKTPPIVGPPAAGRWARQDPAAADRLTAARAALSDLSKEVSVPVEN
LLQPDLVRRLCWDWKLEPDSDIAEVESAIETKLTSGGARGWQRTLTVPVLAEALNSVVPA
EPEVEEPES
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtcaccgatgatgcaaccgagcccacctccgacgtagttccgctgctcgtt
ccgcgtgacggagttccggacgtcatcaccactgccgccggtgtcgccgacgccgcggcc
gcgctggcctccggccacggcccgctcgccgtggacgccgagcgcgcatccggattccgc
tattcggcacgggcgtacctgatccagcttcgacgcgaaggagcaggatcgttcctgctc
gacccgattccgacagcgcaagacctgcagccgttggccgaggtgatcaacccgttgcaa
tgggtgctgcactctgccgatcaggatctccccggcctcgccgaactgggcctgacgccg
gccgagctgttcgacaccgaactggccggacgactggccgggttcgagcgagtcggactc
gccgcgatcgtggaacgaaccctgcgagtggaacttcgcaagggtcacggggctgcggac
tggtcgacacgtccgctgccggacgcctggttgaactacgccgccctcgacgtcgaagtg
cttctcgaactgcgcgacgcaatggaagccgaactcgaatcccaaggcaagctcgagtgg
gcgaaggaagagttcgagtacatccgtctggccggcccgcccaagcccaaaccggaccgc
tggcgtcgtacgtcgcacatcacctcactcaagaccacccgtcagttggcggcggtacgg
gcgctgtggcaagcgcgcgaggatctcgcacgcaagcgcgacgtgtctccgagtcgggtt
cttcctgactccgcgatcatcgatgccgctctcaaagatcctcggtcgctggatgcgctc
cgctcgcttcccgtcttcggcggaccacgtcaacgccgttattcgcgtatctggatggac
gcactggaagccgcgcgcaggctccccgacagcgagcttccgccgaaaaccccgcccatc
gtcgggccgcccgctgccggccgctgggcccgccaggatccagcggcggctgatcggttg
accgcggcgcgcgcagcactgtcggacctgagcaaagaggtttcggtgcccgtggagaat
ctgctccaacccgacctggtcaggcgcctgtgctgggactggaaactggaacccgactcg
gacatcgccgaagtcgagagtgcgatcgagaccaagctcacttccggtggcgcacgtggc
tggcaacgcactttgaccgttcccgtcctcgccgaggcactgaactccgtggtcccggcc
gagcccgaagtggaagagccggaatcctga
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