Rhodococcus sp. 008: AOT96_25470
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Entry
AOT96_25470 CDS
T05462
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AOT96_25470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_25470
DNA repair and recombination proteins [BR:
rhod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AOT96_25470
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ANQ73809
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All DBs
Position
complement(5469103..5469951)
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AA seq
282 aa
AA seq
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MGGMRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYNRVCSECGNTVQF
ADIDKAYDSEDGSRVILSDEDFNKLPAAEKHEIPVLEFVANDQIDPILFEKSYFLEPDSA
SPKAYVLLSTVLTESDRTALVHFTLRQKTRLAAMRARDGVLVIQTLLWPDEVRAAEFPSL
DDVEKPKAKELKMAQTLVESMAGDFDPTEFTDDYQLQLRQLLDEMIENGGKKVIPAAEVD
QEGTDAEVVDLVAALQRSVDEAKSNASKAGSSKSTTPRKKRA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcatgcgctcgatttggaaaggctcgatagccttcggtctggtcaacgtcccg
gtcaaggtgtactcggcgaccgaggaccacgacatccgatttcaccaggtccatgcaaaa
gacggtggccgcatcaagtacaaccgtgtgtgttccgagtgcggaaacacggttcagttc
gcggacatcgacaaggcgtacgactcggaagacggatcgcgcgtcatcttgagcgacgag
gacttcaacaaactcccggctgcggagaagcacgagattccggtgctggaattcgtggcg
aacgatcagatcgatccgatcttgttcgagaagagttacttcctcgaacccgattcggcg
tcgccgaaggcgtacgtcctgctttcgactgtgctcaccgagagtgatcgaacggcactg
gtgcatttcacgctgcgacagaagacgcgcctggccgcgatgcgcgctcgcgatggtgtt
ctggtgatccagaccttgctgtggcccgacgaagttcgtgcagcagagttcccttccctc
gacgacgtggagaagccgaaggcgaaggaactgaagatggcgcagacgctggtcgagagc
atggcgggcgacttcgatccgaccgagttcaccgacgactaccagctccaactgaggcag
ttgctcgacgagatgatcgagaacggcggcaagaaggtcatcccggccgccgaggtcgac
caggagggcaccgacgcagaggtggtcgacctggttgccgcactgcagcgcagtgtggac
gaagcgaagtcgaacgcctccaaggccggctcgtcgaagtcgaccacaccgaggaagaaa
cgagcctga
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