Rhodococcus sp. 008: AOT96_28965
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Entry
AOT96_28965 CDS
T05462
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod03030
DNA replication
rhod03430
Mismatch repair
rhod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOT96_28965
03430 Mismatch repair
AOT96_28965
03440 Homologous recombination
AOT96_28965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhod03032
]
AOT96_28965
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_28965
Enzymes [BR:
rhod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOT96_28965
DNA replication proteins [BR:
rhod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOT96_28965
DNA repair and recombination proteins [BR:
rhod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOT96_28965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ANQ74400
LinkDB
All DBs
Position
complement(6268740..6269717)
Genome browser
AA seq
325 aa
AA seq
DB search
MSNPSGVDPLHLVLGDDEFLIDRTVSQLIRAVRGDRGQGISDLPVTKMRAGDTNAPELAE
LLSPSLFAEDRVIVLEAAAEAGKDAVALVLEAAREPAEGVVLIVVHSGGGRAKALAPALE
KLGATVHNCGKLNKSQLVDFVRGEFRTADVRVAPDAIAAMIESVGSNLRELASACSQLAA
DTGGKIDVDAVHKYYSGKAEVSGFDVADKVIVGDTRGALEALRWADQIGTAHVLLADALA
DAVHTIAKVGPFARGGDPFRLASDLGMPPWKVKKAIKEVGGWDPTSIGAAMQIVAALNAD
VKGAAVDSSFALEMAVRKVCALRKN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatccgtctggagtcgatccgctgcatcttgttctcggggacgacgagttcctg
atcgaccgcacggtatcgcagctcatcagagccgtccgcggtgaccgcggccagggtatt
tcggatctcccggtgaccaagatgcgcgcgggcgacaccaatgctcccgagttggccgag
ttgctcagcccttctctttttgccgaagaccgtgtgatcgtcttggaagcggctgcagaa
gcaggcaaagatgccgtagcgcttgtcctggaggctgcacgcgagccggcagaaggtgtg
gttctgatcgtcgtgcactcgggcggcggtcgcgcgaaagcgttggcgccggccctcgag
aagctcggcgcgacggttcacaactgcggaaaactgaacaagagtcagcttgtcgacttc
gtccggggtgagtttcggaccgcagacgtcagggttgcgccagatgcgatcgccgcgatg
atcgaaagcgtcggctccaacctccgcgaactagcgtcggcctgctcgcaattggcggca
gatacgggcggcaagatcgacgtcgatgcggtccacaagtattactcgggcaaggccgag
gtttccggattcgacgtggccgacaaagtcatcgtcggcgatacccggggtgcgctcgag
gcgctccgatgggcagatcagatcggaacagcccatgttctgctcgcggatgccctcgct
gacgcagtccacaccatcgcgaaggtcggcccgtttgcacggggcggtgacccgttccgg
ttggcgtcggatctcggaatgccgccgtggaaggtcaagaaggcgatcaaggaggtcggc
ggctgggatcccacgtcgatcggcgctgcgatgcagatcgtcgccgccctcaatgccgac
gtgaagggtgccgcagtcgactcgtccttcgccctggagatggcagtgcggaaagtgtgc
gcgttgcggaagaactga
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