Rhodococcus sp. 008: AOT96_29660
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Entry
AOT96_29660 CDS
T05462
Name
(GenBank) peptidase
KO
K20276
large repetitive protein
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOT96_29660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5979
Big_8
DUF7601
Gram_pos_anchor
Candida_ALS_N
DUF5666
Motif
Other DBs
NCBI-ProteinID:
ANQ74515
LinkDB
All DBs
Position
6418908..6423512
Genome browser
AA seq
1534 aa
AA seq
DB search
MIVAVLALVVSSFSFVQVASADDVGTSTTIVPTTIVPTTPKPPATTTEAPLKTTAPPTST
SESPTSAKPPITTASSSTTSVAAQRLAARGVNPGIDVKITDVQVEGKNDQQITVGDSVTV
KGIWDASSASPQPGDQFTIEFPGELKLQSNPTIALEGDDGTVWGTCDLAASTNLMTCVLS
DAVADRPDEVKGDFFVYTKAVEYTTSETVDFTINNKVTQVDLPGTGGITDGRVIGESTKS
GKLQDNKQSVRWTIDIPGADLAKLDTGNTGSVTLSDELSDNMKVCAGSLLNAKLWSGRPG
DLKETPGGVTVTQPDAGDQVTININNGAPFEGNKLYRIEYTSCTTSGVVDLKGTQYTNSV
TIGDTTVASDGVGQDYAPQTEPWKGGYLDGGKRNMEAVWTIVVPGTDIAANNHKIDITDT
FGGPHAVCASGVQVVIEKSDYLPGRENEPNYRTPAAGFTIAPIGAVAGASTFTAAITVDN
PDTFNEEQYYYLTYRTCLTTTEVPDSEDHLTNSAVVNKTSITGKTEGPGFTSGKNGAINT
TSQTIGGVEQPAGTTLNWTVEISGHDLEGLTEPAVINDRFSPNMTVCEIGGDLKSNLNLK
VVAQDFFDGNKKRDITDATSVARADGGFDLTLPLDADGYSRQTKYLVSYTLCTSSGGLDQ
RDTEYSNTLTYAGKQTLSKSVKQEWGGGGTGQGVSRGSFSLLKEIAPFSEKFPQDTEFTV
KVEEFAPGQDPATDAPVSSYEIKVKADGTPVSGINPRGTGWQIRLSEINLPTVDGVYFER
GTFRPSEGVTLNGDRTEALVTITPKSNVGVTLLNKASLGSARITKSVIGDGVRTGLEAFV
VNAEIAFGDDAAGNELRQFTLKDGQHYDLGKLPIGAKVTFTEVQPTNTDLVTWSLPVISP
KTLTIGTDASANTVSVTNEATITQGTFEVSKKLTGPKASDKAVPASFDVIATWLDTDDNP
QSKTLSLPSDGTPVPFGENLPGGTEVTLTELVPANGDGLAYGVPAYSGNVRISPDNAAVV
TIGKDLRKIEVSNFVDVNDGTLRIAKQVGGEAAEAVGDDVEFTVEARWRDGVEYRTQVLS
VKQGQTTPLGVDLPVGTEVTFTETGRPDVDGVEWGTISWGTSPEGESWLHSNLDGTATGI
VSDDPTNGRLITLSNEALWKFGSVEFTKFILDADGNPVRAPEADLPDSATFEVRIDGIDP
ALPAGTDFPAVGQTITLDAANDWSWTSDEVVPRNTVITFSEVDPKPLAGIDWARPYYYVS
ADAGDADYRDTVKAVAGEKAVVEIHNRPIPTTEVDIDKIVTGPKGSQVAKDGSTIFQVTA
TWTDIDNEARSCVLDVKPGASVTPTAQCDAAVIDGRVQFPLNTDITFTETGAHTDVTNVK
WGDVIWGVKEGKADVSKIDGEPTATSVKLTGEANKSVVLGLENKTSSNGLIIIPIPIPLP
PWEIPTWPGSEVPGGSGTDVSTPGNNAPGNNGGGHNGAPGTPAPGNPAQAKPDQSSSLPV
TGANVIWLAGLALALIGGGAWLTLRNRKRAPGQE
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgcggtcctggcgctggtcgtatcgtcgttctctttcgtccaggttgcctcg
gccgatgacgtcgggacctcgaccaccatagttccgaccacaatagttccgaccacaccg
aagccgcccgcgactacgacggaggcgccactgaagacgacggcaccgcctacttccacg
tcggagtcacccacttctgcgaaaccgccgatcacgacggcgtcctcgtcgacgacttct
gtggcggcgcagcgactggccgcacgcggagtcaatcccggcatcgatgtgaaaatcacc
gacgtccaggtcgaaggaaagaacgaccagcagatcacggtcggggactccgtcacggtg
aagggcatttgggacgcgtcaagcgcgagtccgcagccgggcgaccagttcaccattgaa
ttccctggcgagctgaagcttcagtccaacccgacgatcgcgctggagggcgacgatggg
acggtttggggcacatgcgatctggctgcttccaccaatctcatgacctgcgtgctctcc
gacgctgtggcggatcggccggacgaggtgaagggcgatttcttcgtctacacgaaggca
gtcgagtacaccacgtcagagactgtggatttcacgatcaacaacaaggtcacgcaggtc
gacctgcccggcacgggcggcatcaccgacggccgcgtaatcggcgagtcgacgaagtcc
ggcaaactccaggacaacaagcagtcagtgcggtggaccatcgacatccccggcgcagat
ctggccaagttggacacaggcaacaccggttcggtgaccctgagcgacgagctctccgac
aacatgaaggtgtgtgcgggcagcctgctcaacgcgaagctgtggtccgggcgcccgggc
gatctcaaagagacccccggcggcgtcaccgtcacccaacccgacgcgggtgatcaggtc
accatcaacatcaacaacggcgcgcccttcgagggcaacaagctctaccgcatcgagtac
acctcatgcacgaccagcggcgtggtggatctcaaggggactcagtacaccaactccgtg
acgatcggtgacaccacggtcgcttcggatggcgtgggacaggactacgcgccgcagacc
gagccctggaagggcggctacctcgacggcggcaagcgcaatatggaagccgtctggacg
attgtggtcccgggcaccgacattgccgccaacaaccacaagatcgacatcaccgacacc
ttcggcggcccccatgcggtctgtgcctcgggcgtgcaggtagtcatcgagaagtctgac
tacctcccagggcgggagaacgaacccaactaccgcactcctgccgcaggattcaccatt
gctcccatcggcgcagtagccggcgcgagtaccttcaccgcggcgatcactgtggataac
ccggacacattcaacgaagaacagtattactacctcacgtaccggacctgcctgaccacc
accgaggtgccagactccgaggaccatctcaccaactcggcggtcgtcaacaagacgtcg
atcacgggaaagactgaggggcctgggttcacgagcggcaagaacggcgcgatcaacacc
acgtcgcagacgatcggcggcgttgagcagccggcaggcaccaccctcaattggaccgtg
gaaatctcaggacacgatctcgagggccttacggaaccggcggtcatcaacgacaggttc
tcaccgaacatgacggtgtgtgaaatcggcggcgatctcaagagcaacctcaatctcaag
gtcgtcgcgcaagacttcttcgacggcaacaagaaacgcgatataaccgacgccacctcg
gtggcgcgcgccgacggcggtttcgatctcaccctccctctggacgcggacggttacagc
cgtcagacgaagtacctcgtcagctacaccctgtgcaccagcagcggcggactggaccag
cgcgacacggaatactccaacaccctcacctatgccggcaagcagacgctgtcgaagagc
gtcaagcaggaatggggcggcggcggcaccggccaaggtgtgtcacggggctcgttctcg
cttctgaaggagatcgctcccttctccgagaaattcccccaagacaccgagttcactgtg
aaagtcgaggagttcgcccccgggcaagatccagcgaccgacgccccggtgagctcctac
gagatcaaggtgaaggctgacgggacacccgtcagtgggatcaacccccgcggaaccggc
tggcagatccgcctgtccgagatcaacctccccaccgttgacggcgtgtacttcgagcga
ggaacgttccgcccgtcagagggcgtgacgctcaacggggaccgcaccgaggcgctggtg
accatcacgccgaagagcaatgtcggtgtcacactgctcaacaaagcgagcctgggatcg
gcgaggatcaccaaatccgtcatcggtgacggagtgcgcacggggctcgaggctttcgtc
gtcaacgcagagatcgccttcggtgacgacgccgccggcaacgagctgcgtcaattcacc
ctgaaggacggtcagcactacgacctgggcaaattgcccatcggagcgaaagtcaccttc
accgaggtccaaccgacgaacaccgaccttgtgacgtggtcgctgccggtgatcagcccg
aagacgctcaccatcggcaccgacgcgtcggcgaacacggtctccgtcaccaacgaggcc
acgatcacgcaaggcaccttcgaagtgagcaaaaagctcacgggcccgaaggcgtccgac
aaggccgtaccggcgagcttcgacgtgattgccacctggctcgatacggacgacaacccg
cagagcaagacgctgtctcttccgtccgacggcaccccggttccgttcggcgagaacctg
ccgggcggcaccgaagtcacactgacagagctggttccggcaaacggtgacggtctcgcc
tatggcgtgcccgcatactccgggaatgtcaggatcagtccggacaacgcagccgtggtg
accatcggcaaggatctgcgcaagatcgaggtgtcgaacttcgtcgacgtcaacgacggc
actctgcgcatcgcaaagcaggtcggcggtgaggccgccgaggccgtcggcgacgacgtg
gagttcacggtcgaggcgcgttggcgcgacggtgtggagtaccgcacccaggtgctgagc
gtcaagcagggacagaccacaccgctcggcgtcgacctccctgtcggcaccgaggtgacc
ttcactgagaccggccgtcccgatgtcgacggagtcgagtggggcacgatctcctggggc
accagcccggaaggcgaatcgtggctgcattcgaacctcgacggcaccgcgacgggcata
gtctccgacgacccgaccaacggtcgactgatcacgctgtcgaacgaggcgctgtggaaa
ttcggatcggtcgaattcacgaagttcatcctcgacgctgacggcaaccccgtccgcgca
cccgaggccgacctgcctgacagcgcgacgttcgaggtccgtatcgacgggatcgatccg
gcactccccgctggaactgatttcccggcagtgggccagaccatcaccctcgatgccgca
aacgactggagctggacgtccgacgaggttgtgccgcggaacaccgtgatcaccttctcc
gaggtcgaccccaagccactggccggtatcgactgggcgcggccgtactactacgtctcc
gcggatgccggtgacgccgattaccgcgacaccgtcaaggcggtggccggtgagaaggct
gtggtggagatccacaaccgcccgatcccgaccaccgaggtggatatcgacaagatcgtg
accggccccaagggcagccaggtggccaaggacggatccacgatcttccaggtcacggct
acgtggacggacatcgacaatgaggcgcggtcttgtgttctcgatgtcaagccgggcgct
tcggtcactccgaccgcccagtgcgacgcagccgtcatcgacggccgggtccagttcccg
ctgaacaccgacatcactttcacagaaaccggtgctcacaccgacgtcaccaacgtcaag
tggggtgacgtgatctggggcgtcaaggaaggcaaggcggatgtctcgaagatcgacggc
gaaccgaccgcaacttccgtcaagctcaccggcgaagcaaacaagtcggtggtcctggga
ctcgagaacaaaaccagcagcaatgggctgatcatcatcccgatcccgatcccgctgccg
ccgtgggaaatcccgacatggccgggctctgaagtacccggaggatcaggcactgacgtg
tcgactcccggcaacaacgctcccggcaataacggtggtggacacaacggtgctccgggc
acacctgctccgggaaatcctgctcaggccaaaccggaccagtcatcgtccctgccggta
accggcgcgaacgtcatctggctcgccggtctagcgctggcactgatcggcggtggcgca
tggctcaccctgcgtaaccgcaagcgtgcacccggccaggagtaa
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integrated database retrieval system
