Rhodopseudomonas sp. P1: LRC39_01100
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Entry
LRC39_01100 CDS
T11217
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00020
Citrate cycle (TCA cycle)
rhoe00190
Oxidative phosphorylation
rhoe00650
Butanoate metabolism
rhoe00720
Other carbon fixation pathways
rhoe01100
Metabolic pathways
rhoe01110
Biosynthesis of secondary metabolites
rhoe01120
Microbial metabolism in diverse environments
rhoe01200
Carbon metabolism
Module
rhoe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhoe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhoe_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRC39_01100 (sdhA)
00650 Butanoate metabolism
LRC39_01100 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LRC39_01100 (sdhA)
00720 Other carbon fixation pathways
LRC39_01100 (sdhA)
Enzymes [BR:
rhoe01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LRC39_01100 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
DAO
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
XAT73591
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All DBs
Position
complement(234327..236150)
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AA seq
607 aa
AA seq
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MAANVNGAPAAGGYAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACITKVFPTRSH
TVAAQGGISASLGNMHKDDWRWHMYDTVKGSDWLGDQDSIEYMVRNAPEAVYELEHWGVP
FSRTEEGKIYQRPFGGMTTEFGKSQAQRTCAAADRTGHAMLHTMYGQALRHSAEFYIEFF
AIDLIMDDQGCCRGVVALKLDDGTIHRFKAQTTILATGGYGRAYASCTSAHTCTGDGGAM
ALRAGLPLQDMEFVQFHPTGIYGSGCLVTEGARGEGGYLVNSEGERFMERYAPSAKDLAS
RDVVSRAMTIEMREGRGVGKKKDHIFLHLDHLAPEVLHERLPGISESARIFAGVDVTREP
IPILPTVHYNMGGIPTNFHGEVVTKKDGDDNAVVPGLMAIGEAACVSVHGANRLGSNSLI
DLVVFGRAAALRCAEKLVPNGKQPELPANSADMSLGRLDKYRYAKGGTPTAKLRERMQHV
MQNNCAVFRTGEVLAEGKELIANVYGSVGDVGVSDRSLVWNSDLVETLEFDNLIVQAVVT
MNSAANRTESRGAHAREDFPDRDDANWMKHTLAWIGDKGDVTIDYRPVHDYTMTNDVQYI
PPKPRVY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaacgtcaacggcgccccggcggcgggcggctacgcctatccgatcgaggac
cacacctatgacgtcgtggtggtcggcgccggcggcgcgggcctgcgcgcggtggtcggc
tgcagcgaagcgggcctccgcaccgcctgcatcaccaaggtgttcccgacccgctcccat
accgtggcggcgcagggcggcatctcggcctcgctcggcaacatgcacaaggacgactgg
cgctggcacatgtacgacaccgtgaaggggtcggactggctcggcgatcaggactcgatc
gagtacatggtccgcaacgcgccggaagccgtgtatgagctcgagcattggggcgtgccg
ttttcgcgcaccgaggaaggcaagatctatcagcgtccgttcggcggcatgaccaccgag
ttcggcaagagccaggcgcagcgcacctgcgcggccgccgaccgcaccggccacgccatg
ctgcacacgatgtacggccaggcgctgcgccattcggccgagttctacatcgagttcttc
gccatcgacctgatcatggacgatcagggctgttgccgcggcgtcgtggcgctaaagctc
gacgacggcaccatccatcgcttcaaggcccagaccaccatcctggcgaccggcggctac
ggccgcgcttacgcatcatgcacgtcggcgcacacctgcaccggcgacggcggcgcgatg
gcgctgcgggccggcttgccgctgcaggacatggagttcgttcagttccacccgaccggc
atctacggttcgggctgtctggtgaccgaaggcgcccgcggtgagggcggctatctggtc
aactccgaaggcgaacgcttcatggagcgctacgcgccgtcggccaaggatctcgcctcg
cgcgacgtggtttcgcgcgcgatgacgatcgaaatgcgcgaaggtcgcggcgtcggcaag
aagaaggaccacatcttcctgcacctcgaccatctggcgccggaagtgctgcacgagcgg
ctgccgggcatctcggaatcggcgcggatcttcgccggcgtcgacgtcacccgtgagccg
atcccgatcctgccgaccgtgcactacaacatgggcggcatcccgacgaacttccacggc
gaagtcgtcaccaagaaggacggcgacgacaacgcagtggtgccgggcctgatggcgatc
ggcgaagccgcctgcgtgtcggtgcacggtgccaaccgcctcggctccaactcgctgatc
gacctcgtggtgttcggccgcgccgctgcgctgcgctgcgccgagaagctggtgccgaac
ggcaagcagccggagctgccggcgaactccgccgacatgtcgctcggccgcctcgacaag
tatcgctacgccaagggcggcaccccgaccgccaagctgcgcgagcggatgcagcacgtg
atgcagaacaactgcgcggtgttccgcaccggcgaagtccttgccgagggcaaggaactg
atcgccaacgtctacggcagcgtcggcgatgtcggcgtgtcggatcgctcgctggtgtgg
aattcggatctcgtcgagaccctcgaattcgacaacctgatcgtccaggcggtggtgacg
atgaactcggccgccaatcgcaccgaaagccgcggcgcccacgcccgcgaagacttcccg
gatcgcgacgacgccaactggatgaagcacacgctggcctggatcggtgacaagggcgac
gtgacgatcgattaccggccggtgcacgactacacgatgaccaacgacgttcagtacatt
ccgccgaagccgcgggtgtattga
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