Rhodopseudomonas sp. P1: LRC39_01250
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Entry
LRC39_01250 CDS
T11217
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe02024
Quorum sensing
rhoe03060
Protein export
rhoe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LRC39_01250 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LRC39_01250 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRC39_01250 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhoe02044
]
LRC39_01250 (ffh)
Enzymes [BR:
rhoe01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LRC39_01250 (ffh)
Secretion system [BR:
rhoe02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LRC39_01250 (ffh)
Eukaryotic Sec-SRP protein
LRC39_01250 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_17
AAA_30
AAA_16
TctA
AAA_31
TrwB_AAD_bind
AAA_22
ArsA_ATPase
Thymidylate_kin
AAA_5
YqeC
AAA_18
AAA_7
ResIII
AAA_14
6PF2K
AAA_25
Motif
Other DBs
NCBI-ProteinID:
XAT73621
LinkDB
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Position
complement(261428..262972)
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AA seq
514 aa
AA seq
DB search
MFDNLSDKLGGILDRLTGRGALSEADVDAAMREIRRALLEADVALEVVRSFTERVREQAV
GATVVKSVKPGQMVVKIVNDELIATLGSEVQSIDLNAVPPVPIMMVGLQGSGKTTTTAKL
ARRMTERDKRKVLMASLDVYRPAAMEQLAVLGRDLSIDTLPIVAGQQPPDIARRAMEAGK
LGGYDVVLLDTAGRTTLDEEMMTEAAEIKAAANPHEVLLVADSLTGQDAVNLARAFDQRV
GLTGIVLTRIDGDGRGGAALSMRAVTGKPIKLMGTGEKTDALEDFHPSRIASRILGMGDI
VSLVEKAAATLDAEKAAAVAEKMRKGKFDLTDLRDQLLQMTKMGGIGGLMGLMPGISKMK
NQIAASGIDDKVLKRQVAIIDSMTREERKNPDILKASRKKRIAAGAGIKVEDVNKLLKMH
RNMADMMKAVGRGKGGPMAGFAKAMGFGGGLPSPDEIKAMQEKMKSGDMPEGLPELPKDL
PASLRGGMPNLPGLTGLSGKPTLPGLGGFLGKKK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaatctctcggataagctgggcggtattctcgatcggctgaccgggcgcggt
gcgctcagcgaggccgatgtcgatgcggcgatgcgcgaaatccgtcgcgcgctgctggaa
gccgacgtcgcgctcgaagtggtgcgctcgttcaccgaacgggtgcgcgagcaggcggtc
ggcgccaccgtcgtcaagtcggtcaagcccggccagatggtggtcaagatcgtcaacgac
gagctgatcgccacgctggggtccgaagttcagtcgatcgaccttaacgccgtgccgccg
gtgccgatcatgatggtcggtctgcaaggctccggtaagaccaccaccaccgccaagctg
gcgcgccgcatgaccgagcgcgacaagcgcaaggtgctgatggcctcgcttgacgtctat
cgtccggccgcgatggagcagctcgcggtgctcggccgcgatctttcgatcgacacgctg
ccgatcgtcgccggtcagcagccgccggatatcgcccggcgtgcgatggaagccggcaag
ctcggcggctacgacgtggtgctactcgacaccgccggccgcaccacgctcgacgaagag
atgatgaccgaggcggccgagatcaaagctgccgccaatccgcacgaagtgctgctggtc
gctgatagcttgaccggtcaggacgccgtcaatctcgcgcgcgcgttcgatcagcgggtc
ggcctcaccggcatcgtgctgacccgtatcgacggcgacggccgcggcggtgccgcgctg
tcgatgcgcgccgtcaccggcaagccgatcaagctgatgggcaccggcgaaaagaccgat
gccctcgaagacttccatccgagccggatcgccagccgcattctcggcatgggcgacatc
gtctcgctggtcgaaaaggccgctgcgacgctggacgccgaaaaggccgccgccgtcgcc
gagaagatgcgcaagggcaagttcgacctgacggacttgcgcgatcagctgctgcagatg
accaagatgggcggcatcggcggcctgatgggcctgatgcccggcatctcgaagatgaag
aaccagatcgccgcctccggcatcgacgacaaggtgctcaagcgccaggttgcgatcatc
gattcgatgacccgcgaggagcgcaagaaccccgacatcctcaaggccagccgcaagaag
cgcatcgccgccggcgccggcatcaaggtcgaggacgtcaacaagttgctgaagatgcat
cgcaacatggccgacatgatgaaggccgtgggtcgcggcaagggcggcccgatggccggc
ttcgccaaggcgatgggcttcggtggtggcctgccctcgccggacgagatcaaggcgatg
caggaaaagatgaagagcggcgacatgcccgaagggctgccggagctgccgaaggacctg
ccggcgtcgctgcgcggcggcatgcccaatctgcccggcctcaccggcctgtccggcaag
ccgactctgccgggcctcggcggcttcctcgggaagaagaaatga
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