Rhodopseudomonas sp. P1: LRC39_01445
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Entry
LRC39_01445 CDS
T11217
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRC39_01445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoe03400
]
LRC39_01445
Enzymes [BR:
rhoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LRC39_01445
DNA repair and recombination proteins [BR:
rhoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LRC39_01445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XAT73656
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All DBs
Position
300700..301512
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AA seq
270 aa
AA seq
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MRLTLTTWNINSVRLRIELVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYEHIALN
GQKGYHGVAVISKLPFVATDIRTFCDIIDSRHISVSVKTDETAPPLVLHNFYVPAGGDIP
DPAVNPKFKHKLSFLDEMKACEPLHPSGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHT
PVECDKLLGVLRAGNWVDVARDRIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALK
DRVIDFKILRDARSWERPSDHVPVTMTMEL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgctcacgacttggaacatcaactcggtgcggcttcgcatcgagctggtg
gcgaaattcctcaaagcccagcgcccggacatcctgtgcctgcaggagacgaagtgtccg
gacgacgcgtttccgctgaagcggttcaagcgcctcggctacgagcacatcgcgctgaac
ggacagaagggctaccacggcgtcgcggtgatttcgaaactgccgtttgtcgccaccgac
atccgcaccttctgcgacatcatcgacagccgacatatctcggtctcggtgaagaccgac
gagaccgcgccgccgctggtgctgcacaatttctatgttccggccggcggtgacattccc
gatccagccgtcaatcccaagttcaagcacaagctgtcgtttctcgacgagatgaaagcc
tgcgagccgctgcatccatccggcgatcagcggcacatcctggtcggcgacctcaacgtc
gcgccgcacgagcacgacgtctggtcgcacaaacagcttctgaaagtggtgtcgcacacg
ccggtcgaatgcgacaagctgctcggggtgctgcgcgccggaaactgggtcgacgtcgcg
cgcgatcgcatcccgctcgatcagaaggtctatacgtggtggagctatcgggctgccgat
tggacggtcggtgaccgcggccggaggctcgaccatatctgggtgtcggaagcgctgaag
gaccgcgtcatcgacttcaagatcctgcgcgacgcgcgcagctgggagcggccgagcgac
cacgtcccagtcacgatgacgatggagctgtag
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