Rhodopseudomonas sp. P1: LRC39_01855
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Entry
LRC39_01855 CDS
T11217
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rhoe Rhodopseudomonas sp. P1
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhoe03021
]
LRC39_01855 (rpoH)
Transcription machinery [BR:
rhoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LRC39_01855 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
KORA
HTH_11
HTH_3
HTH_7
GntR
HTH_28
GP3_package
HTH_Crp_2
HTH_23
HTH_20
Motif
Other DBs
NCBI-ProteinID:
XAT73735
LinkDB
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Position
complement(384031..384930)
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AA seq
299 aa
AA seq
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MARAATLPVLNGESGLARYLAEIRKFPMLEPGQEYMLAKRWREHGDRDAAHQLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLHPDQVKLIATRLGVTEQDVVDMNRRL
GGDASLNAPIRDDGEPGEWQDWLVDQSPSQEAVMAEHEELDQRRAALNGAIQVLNPRERR
IFEARRLADEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQSAVKGTIARQEQAALEAAH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgctgctacgctcccggtccttaacggagaatccggcctcgctcgttacctt
gcggaaatccgcaagtttccgatgctcgagcccggccaagagtacatgctcgccaagcgc
tggcgcgaacacggtgatcgcgacgcggcgcatcaactcgtcaccagccaccttcgcctc
gtcgccaagatcgcgatgggctaccgcggctatggcctgccgatttccgaagtcgtctcc
gaaggcaacgtcggcctgatgcaggcggtgaagcggttcgagcccgagaagggcttccgc
ctcgccacctacgcgatgtggtggatcaaggcgtcgattcaagagtacatcctgcgttcg
tggtcacttgtgaagatggggaccaccgcgaaccagaagaagctgttcttcaacctgcgc
aaggcgaagagcaagatttcggcgctggacgagggtgatctgcatcccgaccaggtcaag
ctgatcgcgacccgtctcggcgtcaccgagcaggacgtggtcgacatgaaccgccgcctc
ggcggcgacgcctcgctcaacgcgccgatccgtgacgatggcgagccgggcgaatggcag
gactggctggtcgatcagtcgccgagccaggaagccgtgatggccgagcacgaagagctc
gaccagcgccgggccgcgctgaacggcgcgatccaggtgctcaacccgcgcgaacggcgg
atcttcgaggcccgccgcctcgccgacgagccgatgacgctggaagacctggccgccgag
ttcggcgtgtcgcgcgagcgcgtgcgccagatcgaggtgcgggcgttcgagaaggtgcag
agcgccgtcaagggcaccatcgcccgccaggagcaggcggcgctggaagccgcgcactga
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