Rhodopseudomonas sp. P1: LRC39_02225
Help
Entry
LRC39_02225 CDS
T11217
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhoe Rhodopseudomonas sp. P1
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoe03016
]
LRC39_02225 (truB)
Enzymes [BR:
rhoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LRC39_02225 (truB)
Transfer RNA biogenesis [BR:
rhoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LRC39_02225 (truB)
Prokaryotic type
LRC39_02225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XAT73803
LinkDB
All DBs
Position
complement(468342..469442)
Genome browser
AA seq
366 aa
AA seq
DB search
MTVTTPDALLAPHDVQHAGADESAAQIRKPRDNNDPRNANRGGGNGKPRRDKRDVHGWVV
LDKPIGMTSTQAVAVLKRLFSAKRAGHAGTLDPLASGGLPIAMGEATKTVPFVMDGRKRY
RFTVAWGEERDTDDTEGRAVATSPERPTAEAIMALLPRFTGVIEQVPPQYSAVKIQGERA
YDLARDGEVVPLVPRPVEIHELTLVEHGDDGRSVFEAECGKGTYVRALARDMGRLLGCYG
HICALRRTVVGPFDESDMIPLEELQALCDRAASGEGSLADALLPVETALDDIPALAVTRA
DAARLHRGQAVLLRGRDAPHCSGTVYVTVAGRLLALAEVGNGELIPKRVFNLTGLTASSA
VRKESI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaccacccccgacgccctgctcgccccgcacgacgtgcagcacgccggcgcc
gacgaatccgccgcgcagatccgtaagccgcgcgacaacaacgacccgcgcaacgccaat
cgcggcggcggcaatggcaagccgcgccgcgacaagcgcgacgtccatggctgggtggtg
ctggacaagccgatcggcatgacctcgacccaggcggtcgcggtgctgaagcggctgttc
tcggccaagcgcgccggccatgccggcaccctcgacccgctcgcctccggcggcctgccg
atcgcgatgggcgaagccaccaagacggtcccgttcgtgatggacggccgcaagcgctat
cggttcaccgtggcgtggggcgaggagcgggataccgacgacaccgagggccgcgcggtt
gccaccagcccggagcggccgaccgccgaggcgatcatggcactgctgccgcggtttacc
ggcgtgatcgaacaggttccgccgcaatattcggccgtgaagatccagggcgagcgcgct
tacgatctggcgcgcgatggcgaggtcgtgccgctggtcccgcggccggtcgagattcac
gaattaacccttgtggaacatggagatgacggccgctcggtgttcgaggccgagtgcggc
aagggcacctatgtacgggcgctcgcccgcgacatgggccggctgctcggctgctacggc
catatctgcgcgctgcgccgcaccgtggtcgggccgttcgacgagtcggacatgattccg
ctggaagaactacaggctttgtgcgatagagcggcgtccggcgagggtagcctcgccgac
gcgctactgcccgttgagaccgcgctggacgacatcccggcgctggccgtcactcgggct
gatgcggcaaggctccatcggggccaggccgttttgttgcgcggacgggatgcgcctcat
tgtagcggcacagtctatgtcacggtggcaggccggcttctggccctcgccgaagtcggc
aatggcgagctcatccccaagcgcgttttcaacctcaccgggctgactgccagctcggcc
gttcgcaaggaaagtatctga
DBGET
integrated database retrieval system
