Rhodopseudomonas sp. P1: LRC39_06165
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Entry
LRC39_06165 CDS
T11217
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LRC39_06165 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoe03400
]
LRC39_06165 (xseA)
Enzymes [BR:
rhoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LRC39_06165 (xseA)
DNA repair and recombination proteins [BR:
rhoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LRC39_06165 (xseA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
MtrH
Motif
Other DBs
NCBI-ProteinID:
XAT74549
LinkDB
All DBs
Position
complement(1309782..1311395)
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AA seq
537 aa
AA seq
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MARLQSPQTLANVGEFTVSELSQALKRTVEDTYGHVRVRGEITGFRGPHSSGHCYFALKD
EGAKIEAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMAL
MEERKKKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPV
RVQGEGSAEQIAAAIRGFNELSPDGPIPQPDLLIVARGGGSLEDLWSFNEEIVVRAAADS
MIPLISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRAELFVEVGGLARRMLSSWQRC
QDFRRNELRAAARALPGASDLLAIPRQRLDNAAASLPRALRANTHAHHRRFAAAAAGMTL
KVLRAQVAHSAHRLDSAGTQLQRCARATLRHRRERFEGLAVRLQASKLANQQAQRMRIAR
EQERLERLAERARRALITLLERRQARVDATGKLLTALSYRGVLARGFALVRDADGRSVHA
AASVAAGARLSVEFADGRVAVTADGDSGSPAEATKPAAAPAKPAKRPASPAGQGSLF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcccgactgcagtccccccaaaccctcgccaatgtcggcgaattcaccgtttccgag
ctgtcgcaagcgctgaagcggacggtcgaggacacctatgggcatgtccgggtgcgcggc
gagatcaccgggtttcgcgggccgcattcgtcgggccactgctatttcgcgctgaaggac
gagggcgccaagatcgaggcggtgatctggaagggcgtggccgggcggatgcggttcaag
ccgcaggaaggcctcgaggtcatcgccaccggcaagctgaccacctaccccggctcgtcg
aaatatcagatcgtgatcgaggcgctcgagcccgccggcgtcggcgcgctgatggcgctg
atggaagagcgcaagaagaagctcgccgccgagggcttgttcgacgaggcgcgcaagcag
ctgctgccgtggctgccggaggtgatcggcgtcgtcacctcgccgaccggcgcggtgatc
cgtgacatcctgcaccgcctggaagaccgtttcccgcgccgcgtgctggtgtggccggtg
cgggtgcagggcgaaggctcggccgaacagatcgccgccgcgatccgcggcttcaacgaa
ctcagcccggatgggccgatcccgcagccggatctgctgatcgtcgcgcgcggtggcggc
tcgctggaagatctgtggtcgttcaacgaagagatcgtggtccgggccgcggccgacagc
atgatcccgctgatctcggcggtcggccacgagaccgacgtcactctgatcgattttgcc
gccgacaagcgtgcgccgaccccgacggcggctgccgaaatggccgtcccggtgcgcgcc
gaactgttcgtcgaagtcggcgggctggcgcggcggatgctgtcgagctggcagcgctgc
caggatttccgccgcaacgaacttcgcgccgctgcacgtgccctgcccggcgcctccgac
ctgctggcgatcccgcggcagcggctcgacaacgcagccgcctcgctgccgcgcgcgctg
cgcgccaacacccatgcgcatcaccgccgcttcgccgctgcggcggccggcatgacgctc
aaggtgctgcgagcgcaggtggcgcacagcgcccaccggctcgatagcgccggcacgcaa
ttgcagcgctgtgcccgcgccacgctgcggcaccgccgggagcggttcgaggggctggcg
gtgcggctgcaggcctcgaagctcgccaatcagcaggcgcagcggatgcggatcgcccgc
gagcaggagcggctggagcgcctagccgagcgggcccggcgggcgttgatcaccctgctg
gaacgccggcaggcgcgggtcgacgccaccggcaagctactaaccgcattatcgtaccgc
ggagtgctggcgcgcgggttcgcgctggtgcgggacgccgacggccgctcggtgcacgcc
gccgcatcggtcgccgcgggcgcccggctcagtgtcgaattcgccgacggccgggtcgcc
gtcaccgccgatggcgacagcggatcgccggccgaggccaccaagccggcggcagcgccg
gccaaaccggccaagcggccggcaagtccggcgggccaggggtcgctgttctag
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