Rhodopseudomonas sp. P1: LRC39_06310
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Entry
LRC39_06310 CDS
T11217
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRC39_06310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoe03019
]
LRC39_06310
Enzymes [BR:
rhoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LRC39_06310
Messenger RNA biogenesis [BR:
rhoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LRC39_06310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XAT74578
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All DBs
Position
1342244..1343500
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AA seq
418 aa
AA seq
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MTDVPVRSDAPWLHTGPAARVLALLNGDGEEARVVGGAVRNALLGEPIGDVDIATTAVPD
EVVRRAKASGIKAVPTGIEHGTVTLVLDGHGFEITTLREDVETFGRKAKVAFGRDWDRDA
QRRDFTINALSMSADGTVHDYVGGLADIATRRVRFIGDPDQRIAEDYLRILRFFRIHAAY
GAGAPDREAYLACIRGRSGLATLSAERLRMEMLKLMIADGAEASVVAMADGGLLLAVLGG
VAYLGAFAAMIVAERDLGLEPDAVRRLGALAVAVTEDAKRLASRLRLSNVEAKRLDSMGH
RWWRLAGMDEATARRRLYRLGEARFHDRMMLAWARAGLGADPAPWRQLIALPQRWQAPTF
PLKAADFLARGFAAGPALGHVLTLAEDAWLAADFPLDPAALRTIADQTAARFARDHLL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtgccggtgcgcagcgatgcgccgtggctgcacacgggaccggcggcgcgg
gtgctcgcgctgctgaacggcgacggcgaagaggcgcgggtggtcggcggcgccgtccgc
aacgcattgctgggcgagccgatcggcgatgtcgacatcgccaccaccgcggttccggat
gaagtggtccgccgtgccaaggcgagcggtatcaaggcggtcccgaccgggatcgagcat
ggcaccgtaacgctggtgctcgacgggcacggcttcgaaatcaccacgctgcgcgaggac
gtcgagaccttcggccgcaaggccaaggtggcgttcggccgcgactgggaccgcgacgca
cagcgccgcgacttcaccatcaatgcactgtcgatgtcggccgacggcaccgtgcacgac
tatgtcggcgggctcgctgacatcgcgacgcggcgagtgcgctttatcggcgatccggac
cagcgcatcgccgaggattacttacgcatcctgcggttcttccgcatccacgccgcctat
ggcgccggggcaccggaccgcgaggcgtatctcgcctgcatccgcggccgcagcgggctt
gcgacgctgtcggccgaaaggctgcggatggagatgctgaagctgatgatcgccgatggc
gcggaggcttcggtggtggcgatggccgatggcgggctgctgctcgcggttctcggcggt
gtcgcctatctcggcgctttcgcggcgatgatcgtcgccgaacgcgaccttggtcttgaa
cccgatgcggtgcggcggctcggtgcgctggcggtcgccgtcactgaggatgccaagcgg
ctcgcatcgcggctgcggctctccaacgtcgaagccaagcggctcgactcgatggggcat
cgctggtggcgtcttgccgggatggacgaagcgaccgcgcggcgccggctgtaccggctt
ggtgaagcgcggtttcacgatcgcatgatgctggcctgggcccgcgcgggcctcggggcc
gatccggcgccgtggcgccaactgatcgcgctgccgcagcgctggcaggcgccgacattc
ccgctgaaggctgctgatttcctggctcgcggcttcgccgcggggcctgcgctcggccac
gtgctgacgctggccgaggatgcctggctggcggccgatttcccgctcgacccggccgcg
ctccgcaccatcgcggatcagaccgcagcaagattcgcgcgcgatcatctgctgtaa
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