Rhodopseudomonas sp. P1: LRC39_09990
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Entry
LRC39_09990 CDS
T11217
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
rhoe Rhodopseudomonas sp. P1
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoe02000
]
LRC39_09990
01504 Antimicrobial resistance genes [BR:
rhoe01504
]
LRC39_09990
Transporters [BR:
rhoe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LRC39_09990
Antimicrobial resistance genes [BR:
rhoe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LRC39_09990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XAT75267
LinkDB
All DBs
Position
2157441..2160596
Genome browser
AA seq
1051 aa
AA seq
DB search
MQRPNLSAWAVAHPSLMLFLILMISVAGLLSYQRLGRAEDPSYTIKVAVVTATWPGATAE
EMQLQVADRIEKKLQELPWFDKITTYSKPGFTAAQMEFRDTTPPAQIPWLFYLIRKKMAD
VKPDLPDGVAGPEVNDEYGDVDSIVYTLRSDSADYAVLKRMAEQVRQRLLKVPNVSKVTI
YGTQDERIFVDFDHVKLANLGIAPRTIFDSLAKQNDLAPVGMVQTQSTRIPLRVSGAFDG
VRAVEETPIASNGTVIRLGDIATVSRGFIDPPQFLVRQRGVPALAIGIVMRKGANILELG
ADVEASMAEVERATPVGVTFERIANQPAVVRDAVGDFMRSFVEALAIVLFVSFVSLGWRV
GIVVATSVPLVLGIVFTLMLTIGIDLHRISLGALIIALGLLVDDAIIAVEMMVVKMEQGF
DRARAASFAWESTAFPMLTGTLVTAAGFLPVGMAASGTGEYAGSIFWVVGIALLASWAVA
VILTPYLGFVLLPHSLSTGTAHAVYDNGLYRRFRRVVTWCIHHRLIVIGITIAAFAISIV
GFGKIQRQFFPTSDRTELFVELRLPGGSGIEATLANAQQAEALVASDDDVVTWSTYVGKG
PPRFLLNVNPELPNESYGELVIVTKDSAARERVKCKIEQAVADGAIAGARVRVKRLAYGP
PIKFPVQFRVIGEDPNTVRSIAYQVRDIMRSNPNVIEPQLDWNEQMPSVRLVVDQDRARA
LGLDPQTISQTLQMLMTGAPVTTVRDRTEKVVVVARAIAAQRNDLGAIDDLTVLSRNGVP
VPLSQIAEIREGHEEAIQWRRDRDMAITVRSDVRDGVQAPFVSSVVWGALADLRQHLPAG
YRIELGGAIEDSSKANGALFAVVPAMLVVMLTVLMLQLQSFAKLALVLLTAPLGLIGACA
GLLLFGKPFGFVALLGLIALAGMIIRNSVILVDQIEQDIAAGHPREEAIVGATVRRARPV
VLTALSAVLAMIPLTRSSFWGPMAVAIMGGLLVATVLTLLFLPALYAAWFCRDPASTSSL
RQRVGGLLEAVRARFSSSLPAILRRRAESGR
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcccaatctctccgcatgggcggtggcacatccgtccttgatgctgtttctg
atcctgatgatcagtgtcgccggtctgctgtcgtatcagcgtctcggccgcgccgaggat
ccgtcctacaccatcaaggtcgcggtggtgacggcgacatggcccggcgcgacggccgaa
gagatgcagcttcaggtcgcggaccggatcgagaagaagctgcaggagctgccctggttc
gacaagatcacgacctattccaagcccggcttcaccgcggcgcagatggagtttcgcgac
actacgccgccggcgcaaatcccttggctgttctatctgatccgcaagaagatggccgac
gtgaagccggacctgcccgacggggtggccggcccggaggtcaacgacgaatacggcgac
gtcgattcgatcgtctacacgctgcgctccgacagcgccgactacgcggtgctgaagcgg
atggcggagcaggtgcggcagcggctgctgaaagtgccgaacgtctccaaggtgacgatc
tacggcacccaggacgagcgcatcttcgtcgatttcgaccacgtcaagctcgccaatctc
ggcatcgcgccgcgcacgatcttcgacagcctcgccaagcagaacgacctcgcgccggtc
ggcatggtccagacccagtcgacccgaattccgctgcgcgtctccggtgcgttcgacggc
gttcgcgcggtggaagaaacgccgatcgcctccaacggcacggtgatcaggctcggcgac
atcgccaccgtgtcgcgcggcttcatcgatccgccgcagtttctggtccggcagcgcggc
gttccggcgctggcgatcggcatcgtgatgcgcaagggcgccaacatcctggagctcggc
gcggatgtcgaagcgtcgatggccgaggtcgaacgagccacgccggtcggcgtcacgttc
gagcggatcgctaatcagcctgcggtcgtccgcgatgcggtcggcgacttcatgcgttcc
ttcgtcgaggccctggcgatcgtgctgttcgtcagtttcgtgtcgctcggctggcgcgtc
ggcatcgtggtcgcgacctcggtgccgctggtgctcggcatcgtgttcacgctgatgctg
acgatcggcatcgatctgcaccggatttccctgggcgcgctgattatcgcgctcggcctg
ctcgtcgacgacgccatcatcgcggtcgagatgatggtggtgaagatggagcagggcttc
gatcgcgcgcgtgcagcctcgttcgcctgggagtcgacggcgtttccgatgctcaccggc
acgctggtcaccgcggcaggctttctgccggtcggcatggcggcgagcggcaccggcgaa
tatgccggcagcatcttctgggtggtcggcattgcgctgctggcgtcgtgggctgtggcg
gtgatcctgacgccgtatctcggtttcgtgctgctgccgcactcgctgagcaccgggacc
gcgcacgcggtctatgacaacggcctgtatcgccgctttcgccgcgtcgtcacctggtgc
atccatcaccgcctgattgtgatcggcatcaccatcgcggcgttcgcgatctcgatcgtc
ggcttcggcaagatccagcggcaattcttcccgacctccgaccgcaccgagctgttcgtc
gaattgcggctgccgggcggcagcgggatcgaggcgacgctcgccaatgcccagcaagcc
gaagcgctggtcgcaagtgatgacgacgtcgtcacctggagcacctatgtgggcaagggc
ccgccgcgcttcctgctcaacgtcaatcccgaactgccgaacgagtcgtatggcgaactc
gtcatcgtcaccaaggacagcgccgcgcgcgagcgggtgaagtgcaagatcgagcaggcc
gtcgccgatggcgcgatcgccggcgcgcgggtgcgggtgaagcggctggcctatggtcct
ccgatcaagtttccggtgcagttccgagtaatcggcgaggaccccaacacggtgcggtcg
atcgcctaccaggtccgcgatatcatgcgcagcaatccgaacgtgatcgagccgcagctc
gattggaacgagcagatgccctcggtgcgtctggtggtcgatcaggatcgggcgcgggcg
ctcgggctcgatccgcagacgatctcgcagacgctgcagatgctgatgaccggcgcgccg
gtgaccaccgtgcgtgaccggaccgagaaggttgtggtggtggcgcgggcgatcgcggcg
cagcgcaacgatctcggcgccatcgacgatctcaccgtgctgtcgcgcaacggcgtgccg
gtgccgctgtcgcagatcgccgagatccgcgaaggccacgaggaagcgatccagtggcgg
cgcgaccgcgacatggcgatcaccgtgcgcagcgatgtgcgcgacggcgtgcaggcgccg
ttcgtctcgtcggtggtgtggggcgcgctggccgatctgcgccagcacctgccggccggt
taccggatcgaactcggcggtgcgatcgaggattcgtcgaaagccaacggtgcgttgttc
gcggtggtgccggcgatgctggtagtgatgctgacggtgctgatgctccagttgcagagc
ttcgccaagctggcgctggtgttgctgacggcgccgctcggcctaatcggcgcctgcgcc
gggctgctgctgttcggcaagccattcggcttcgtggcgctgctcggactgatcgcgctc
gccggcatgatcattcgcaattcggtgatcctggtcgaccagatcgagcaggacatcgcg
gcggggcatccgcgcgaggaggcgatcgtcggcgccaccgtccgccgcgcgcggccggtg
gtcctgactgcgctcagtgccgtgctggcgatgatcccgctgacgcgttcgagcttctgg
ggcccgatggcggtcgcgatcatgggcggactgctggtcgccaccgtgctgacgctgctg
ttcctgccggcgctgtacgcggcgtggttctgccgcgatccggcctcgacatcgtcgctg
cggcaacgcgtcggcgggctcctggaggcggtccgcgccaggttcagctcatcgctcccg
gcgatcctgcgccggcgcgcggaatctggacgctga
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