KEGG   Rhodopseudomonas sp. P1: LRC39_11040
Entry
LRC39_11040       CDS       T11217                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rhoe  Rhodopseudomonas sp. P1
Pathway
rhoe00061  Fatty acid biosynthesis
rhoe00071  Fatty acid degradation
rhoe01100  Metabolic pathways
rhoe01212  Fatty acid metabolism
rhoe02024  Quorum sensing
rhoe04146  Peroxisome
Module
rhoe_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rhoe00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LRC39_11040
   00071 Fatty acid degradation
    LRC39_11040
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LRC39_11040
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LRC39_11040
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhoe01004]
    LRC39_11040
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhoe04147]
    LRC39_11040
Enzymes [BR:rhoe01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LRC39_11040
Lipid biosynthesis proteins [BR:rhoe01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LRC39_11040
Exosome [BR:rhoe04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LRC39_11040
  Exosomal proteins of breast cancer cells
   LRC39_11040
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_3
Other DBs
NCBI-ProteinID: XAT75461
LinkDB
Position
2379303..2380907
AA seq 534 aa
MTSLEATGGVPGPGRIGRVAIGDILRKSAKRFPNRIALTDGARQVSYGELERDANRFANA
LVARGLQPGAKISTICNNSVEFVKALFGIHRAGLVWVPINTMLGPDDMSYILDHAGVKVA
VIDDNLFGQPERRAALEARGIDLIAVNLAGKAAETGLPTFDQLLDGQSEIEPEVTFDDRD
LAMIIYTSGTTSRPKGAMHGHLAVTMAAMSNAIEMQLSRTDGITGQFPLFHCAAHVVLLS
YLIVGGKMALMRGFDPVACMEAIQRDKLTVFIGLPLMYQVILDHPRRKEFDLSTLRCCIY
TMAPMPRPLLERAIAELCPTFVQPSGQTEMYPATTMSQPDRQLARFGNYWGESTLVNETA
IMDDAGNLLGVGQVGEIVHRGPNVMLGYYKDPEATEAARKFGWHHTGDLALIDEHGEVLF
LDRKKDMIKSGGENVASVKIEETLLAHPAVMNAAVVGLPHPQWGEAVSGFVKLKPGAAAT
EAEIIEHCKKHLGGFQVPKLLRIVDDMPMTATGKLRKVELRNAFTDHFMLGQTG
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgaccagtcttgaagcgaccggcggcgtgccgggaccggggcggatcggccgcgtggcg
atcggcgacatcttgcgtaaatcggcgaagcggtttccgaaccgcatcgcactgaccgac
ggcgcccgtcaggtcagctatggcgaactcgaacgcgacgccaaccgcttcgccaatgct
ctggtcgcgcgcgggctgcagccgggcgccaagatctcgacgatctgcaacaactcggtc
gagttcgtcaaagcgctgttcggcattcatcgtgctggcctcgtctgggtgccgatcaac
accatgctcggtccggacgacatgagctacatcctcgaccacgccggcgtgaaggtcgcg
gtgatcgacgacaatctgttcggccagccggaacgccgcgccgcgctggaagcgcgcggc
atcgatctgatcgctgtcaatctggccggcaaggccgccgaaaccggactgccgaccttc
gatcaattgctcgacggccagtccgagatcgaacctgaagtgacgttcgacgatcgcgat
ctggcgatgatcatctacacctcgggcaccacctcgcggccgaagggggcgatgcacggc
caccttgcggtgacgatggcggcgatgagcaatgcgatcgagatgcagctgtcgcgcacc
gacggcatcaccggacaatttccgctgttccactgtgccgctcacgtcgtgctgctgagc
tatctgatcgtcggcggcaagatggcgctgatgcgcggcttcgatccggtcgcctgcatg
gaggcgatccagcgcgacaagctcaccgtcttcatcggcctgccgctgatgtatcaggtg
atcctcgaccatccgcggcgcaaggagttcgatctctcgaccctgcgctgctgcatctac
accatggcgccgatgccgcggccgctgctcgagcgcgcgatcgccgagctgtgcccgacc
tttgtccagccgtcggggcagaccgagatgtatccggcgacgacgatgtcgcagccggac
cgccagctcgctcgcttcggcaattactggggcgagtcgacgctggtcaacgagaccgcg
atcatggacgacgccggcaaccttctcggcgtcggtcaggtgggcgagatcgtgcatcgc
ggccccaacgtgatgctcggttattacaaggatcccgaagccacggaggccgcgcgaaaa
ttcggctggcaccacaccggtgacctggcgctgatcgacgagcacggcgaggtgctgttc
ctcgaccgcaagaaggacatgatcaagtccggcggtgagaacgtcgcctcggtcaagatc
gaggagacgctgctggcgcatccggcggtgatgaatgccgcggttgtcggcctgccgcat
ccgcaatggggcgaggcggtgtccggcttcgtcaagctcaagcccggcgcggccgcaacc
gaggccgagattatcgagcactgcaagaagcatctcggcggcttccaggtgccgaagctg
ctgcgcatcgtcgacgacatgccgatgaccgcgaccggcaaactgcgcaaggtcgaactg
cgcaacgccttcaccgatcacttcatgctcgggcagacggggtga

DBGET integrated database retrieval system