Rhodopseudomonas sp. P1: LRC39_11160
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Entry
LRC39_11160 CDS
T11217
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRC39_11160 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoe03019
]
LRC39_11160 (groL)
03110 Chaperones and folding catalysts [BR:
rhoe03110
]
LRC39_11160 (groL)
03029 Mitochondrial biogenesis [BR:
rhoe03029
]
LRC39_11160 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoe04147
]
LRC39_11160 (groL)
Enzymes [BR:
rhoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LRC39_11160 (groL)
Messenger RNA biogenesis [BR:
rhoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LRC39_11160 (groL)
Chaperones and folding catalysts [BR:
rhoe03110
]
Heat shock proteins
HSP60 / Chaperonin
LRC39_11160 (groL)
Mitochondrial biogenesis [BR:
rhoe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LRC39_11160 (groL)
Exosome [BR:
rhoe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LRC39_11160 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LRC39_11160 (groL)
Exosomal proteins of breast cancer cells
LRC39_11160 (groL)
Exosomal proteins of colorectal cancer cells
LRC39_11160 (groL)
Exosomal proteins of bladder cancer cells
LRC39_11160 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
XAT75483
LinkDB
All DBs
Position
complement(2410067..2411707)
Genome browser
AA seq
546 aa
AA seq
DB search
MSAKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKDI
ELDDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDSEIGKFLADAMKKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDDAYILINEKKLSNLNELLPLLEAV
VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQA
ISEDLGIKMENVTLQMLGRAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALL
RASEQLKGLKTKNDDQKTGVEIVRRALSAPARQIAINAGEDGSVIVGKVLEKEQYAFGFD
SQSGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAMIAELPKKNAGGPAMPPGGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaaagaagtcaaattcggcgtcgacgcccgcgaccgcatgctgcgcggcgtg
gacattctcgccaacgccgtgaaggtcacgctgggtccgaagggccgcaacgtcgtcctc
gacaagtcgttcggcgcgccgcgcatcaccaaggacggcgtcaccgtcgccaaggacatc
gagctcgacgacaagttcgagaacatgggcgcccagatggtgcgcgaagtcgcctcgaag
tcggccgacgccgccggtgacggcaccaccaccgcgaccgtgctggcccaggcgatcgtc
cgcgaaggcgccaaggcggttgccgccggcatgaacccgatggatctgaagcgcggtatc
gacctcgcggtggaagccgtcgtcgccgacctcgtcaagaactccaagaaggtcacctcg
aacgacgaaatcgctcaggtcggcaccatctcggccaacggcgactcggagatcggcaag
ttcctcgccgacgcgatgaagaaggtcggcaacgagggtgtgatcaccgtcgaggaagcc
aagtcgctcgagaccgaactcgatgtcgtcgagggcatgcagttcgaccgcggctacatc
tcgccctacttcgtcaccaacgccgacaagatgcgcgttgaattcgacgacgcctacatc
ctgatcaacgagaagaagctctccaacctcaacgagctgttgccgctgctcgaagccgtg
gtgcagaccggcaagccgctggtgatcgtcgccgaagacgtcgaaggcgaagccctcgcc
accctcgtcgtcaaccgtctgcgcggcggcctcaaggtcgcggccgtcaaggcgccgggc
ttcggtgaccgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggcg
atctcggaagacctcggcatcaagatggagaacgtcaccctgcagatgctgggtcgcgcc
aagaaggtgatgatcgacaaggagaacaccacgatcgtcaacggcgccggcaagaaggcc
gacatcgaagcccgcgtcgcgcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctgcaggagcgtctggccaagctcgccggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtgaaggagcgcaaggatcgcgttgatgacgcgatg
cacgccacccgcgccgcggtcgaggaaggcatcgtcccgggcggcggcgtcgctctgctg
cgcgcttccgagcagctcaagggcctcaagaccaagaacgacgaccagaagaccggcgtc
gagatcgtgcgtcgcgccctctccgccccggcccgtcagatcgccatcaacgccggcgaa
gacggctcggtgatcgtcggcaaggtgctcgagaaggagcagtacgcgttcggcttcgac
tcgcagtcgggcgaatacggcgacctggtcaagaagggcatcatcgacccgaccaaggtg
gtgcgcaccgcgatccagaacgccgcctcggtggccgcgctgctgatcaccaccgaagcg
atgatcgccgaactgccgaagaagaacgccggcggccccgcgatgcccccgggcggcggc
atgggcggcatggacttctaa
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