Rhodopseudomonas sp. P1: LRC39_12170
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Entry
LRC39_12170 CDS
T11217
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRC39_12170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoe02000
]
LRC39_12170
Transporters [BR:
rhoe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LRC39_12170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XAT75680
LinkDB
All DBs
Position
complement(2624692..2626308)
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AA seq
538 aa
AA seq
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MPLSRIEISRRTALLTSAAIAANVINPMRAFAQETPRKGGVFNVHYGAEQRQLNPSLQAS
TGVYIIGGKIQEPLVDLDAAGNPVGVLAESWESTPDGKTITFKLRKGVTWHDGKPFTSED
VAFTAMNMWKKILNYGSTLQLFLTAVDTPDPQTAIFRYERPMPLNLLLRALPDLGYVSAK
HIYETGDIRQNPANLAPVGTGPFKFNKYERGQYIIADRNDNYWRPNAPYLDRIVWKVITD
RAAAAAQLEAGGLQLSPFSGLTISDMARLGKDKRFVVSTKGNEGNARTNTIEFNFRRKEL
SDIRVRRAIAHAINVPFFIENFLGDFAKLGTGPIPSTSTDFYPGPNTPQYPYDKQKAIAL
LDEAGLKPGVGGNRLSLRLLPAPWGEDISLWATFIQQSLGEVGIQVEVVRNDGGGFLKQV
YDEHVFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDPTIDKIIDDAATEVD
PAKRKALYADFVTRANTELPIWMPIEQLFVTVITAKARNHSNTPRWSSSTWHDLWLAE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctcgcggatcgagattagccgccgcactgcgctactgacgtcggccgcgatc
gccgccaatgtgatcaacccgatgcgcgccttcgcccaggagacgccgcgcaagggtggc
gttttcaacgtccattatggcgccgaacagcgacagctcaatccgagcctgcaggcctcg
accggcgtctacatcatcggcggcaagatccaggaaccgctggtcgacctcgacgcggcc
ggcaatccggtcggcgtgctggcggagagctgggaatccacgcccgacggtaagaccatc
accttcaagctgcgcaagggcgtgacgtggcacgacggcaagccgttcacctccgaggac
gtcgccttcacggcgatgaatatgtggaagaagatcctcaactacggatcgaccctgcag
ctgttcctcaccgcggtcgacacgcccgatccgcaaaccgcgatcttccgctacgagcgg
ccgatgccgctgaacctgctgctgcgcgcgctgccggatcttggctacgtctcggccaag
cacatctacgagaccggcgacatccgccagaatccggccaacctggcgccggtcggcacc
ggccccttcaagttcaacaagtacgagcgcggccagtacatcatcgccgaccgcaacgac
aattactggcggccgaacgctccctatctcgaccgcatcgtctggaaggtgatcaccgac
cgcgccgcggccgccgcgcagctcgaagccggcggactgcagctcagcccgttctctggt
ctgacgatttccgatatggctcggctcggcaaggacaagcgcttcgtcgtctccaccaag
ggcaacgaaggcaacgcccgcaccaacaccatcgagttcaacttccgccgcaaggagctg
tcggacatccgcgtccgccgcgccatcgcgcacgccatcaacgtgccgttcttcatcgag
aacttcctcggcgacttcgccaagctcggcaccggcccgatcccttcaacctcgacggac
ttctatccgggcccgaacacgccgcaatatccctatgacaagcagaaggcgatcgccctg
ctcgacgaggccgggctgaagcccggcgtcggcggcaaccggctgtcgctgcggctgctg
cccgcgccgtggggcgaggatatctcgctgtgggcgaccttcatccagcagtcgctcggt
gaggtcggcatccaggtcgaggtggtgcgcaacgacggcggcggcttcctcaagcaggtc
tatgacgagcacgtcttcgatctcgccaccggctggcaccagtatcgcaacgatcctgcg
gtctcgaccacggtgtggtatcgctccggtcagccgaagggcgcgccctggaccaaccaa
tggggctgggaagacccgacgatcgacaagatcatcgacgacgccgccaccgaagtcgat
ccggccaagcgcaaggcgctgtatgccgacttcgtcacccgcgccaataccgagctgccc
atctggatgcccattgagcaattgttcgtcacggtgatcaccgcgaaggcgcgtaatcac
tccaatacgccacgctggtcgtcgtcgacctggcatgatctttggctggccgaatag
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