Rhodopseudomonas sp. P1: LRC39_12925
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Entry
LRC39_12925 CDS
T11217
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00280
Valine, leucine and isoleucine degradation
rhoe00650
Butanoate metabolism
rhoe00907
Pinene, camphor and geraniol degradation
rhoe01100
Metabolic pathways
rhoe01120
Microbial metabolism in diverse environments
rhoe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LRC39_12925
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LRC39_12925
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LRC39_12925
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LRC39_12925
Enzymes [BR:
rhoe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LRC39_12925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
XAT71190
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All DBs
Position
2791520..2792434
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AA seq
304 aa
AA seq
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MTDIIRIVEVGPRDGLQNEKTPVSVADRIAFVEALVAAGLSTVEVGAFVSPKAIPQMVGS
DEVLRASLKLPGEFHVLVPNEKGYEAARAAGAQVVAVFASASEGFSRANINCSVAESIER
FRPVLRRAQADGVKVRGYISCVLGCPFDGNVPVQAVVDAATTLWDLGCYEISLGDTIGVG
TPKKVRELLRACAEAIPMQSLAMHFHDTYGQALANLYAGLEEGARVIDSAAGGLGGCPYA
PGATGNVATEDVLYMLDGMGVPMGVDMDRLIAATNSVAALLGRPPVSRVVNALNAKNKRV
GSAS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcatccgtatcgtcgaagtcggcccgcgcgacgggctacagaacgagaag
acgccggtcagcgtcgccgaccgcatcgccttcgtcgaggcgctggttgcggcggggctg
tcgaccgtcgaggtcggcgcgttcgtgtcgccgaaggcgatcccgcagatggtcggctcc
gacgaggtgctgcgcgcctcgctcaagctgccgggcgagtttcacgtcctggtgcccaat
gagaagggctatgaggccgcccgcgccgccggggcgcaggtcgtcgcggtgttcgcctcg
gcctcggaaggattctcgcgcgccaacatcaactgctcggtggcggagtcgatcgagcgg
ttcaggccggtgctgaggcgcgcgcaggccgacggcgtcaaggtccgcggctacatctcc
tgcgtgctcggttgtccgtttgacggcaacgtgccggtgcaggcggtggtcgatgccgcg
accacgctgtgggatctcggctgttacgaaatctctctcggcgacaccatcggcgtcggc
acgccgaagaaagttcgcgagctgctgcgcgcctgcgccgaggcgatcccgatgcagtcg
ctcgccatgcacttccacgacacctacggccaggcgctcgccaatctctatgccgggctg
gaagagggcgcccgcgtgatcgacagcgccgccggcggcctcggcggctgcccctatgcg
ccgggtgctaccggcaacgttgcgaccgaagatgtgctctacatgctggatggcatgggc
gtgccgatgggcgtcgacatggacaggctgattgccgcgacgaacagcgtcgccgcactg
ctcggccgcccgccggtcagccgagtcgtcaatgcgctgaatgctaagaacaagcgggtg
ggttcagcgtcctag
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