Rhodopseudomonas sp. P1: LRC39_15610
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Entry
LRC39_15610 CDS
T11217
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRC39_15610 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhoe01007
]
LRC39_15610 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhoe03016
]
LRC39_15610 (aspS)
03029 Mitochondrial biogenesis [BR:
rhoe03029
]
LRC39_15610 (aspS)
Enzymes [BR:
rhoe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LRC39_15610 (aspS)
Amino acid related enzymes [BR:
rhoe01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LRC39_15610 (aspS)
Transfer RNA biogenesis [BR:
rhoe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LRC39_15610 (aspS)
Prokaryotic type
Other AARSs
LRC39_15610 (aspS)
Mitochondrial biogenesis [BR:
rhoe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LRC39_15610 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
XAT71697
LinkDB
All DBs
Position
complement(3369862..3371637)
Genome browser
AA seq
591 aa
AA seq
DB search
MHRYRTHTCGALRDSHIDQTVRLSGWCHRIRDHGGVLFIDLRDHYGITQCVADPDSPAFK
DAEKLRAEWVVRMDGRVRRRPEGTENPDLPTGAVEVFVTEIEVLGPAGELPLPVFGEQEY
PEDVRLRYRFLDLRREKLHQNIMTRGAIVDSMRRRMKEQGFFEFQTPILTASSPEGARDF
LVPSRIHPGKFYALPQAPQQYKQLLMMSGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE
MSFVTQDDIFAAMEPVITGVFEEFAKGKRVTKGWPRIAFADSMRKYGTDKPDLRNPIEMQ
DVSEHFRGSGFKVFARMLEEQRNQVWAIPGPGGGSRAFCDRMNSWAQGEGQPGLGYIMWR
EGGEGAGPLANNIGPERTEAIRAALGLKAGDAAFFVAGDPSKFVKFAGLARTKVGEELNL
IDKDQFSLAWVVDFPMYEYNEDDKKVDFSHNPFSMPQGGLDALTSQDPLTIKAFQYDITC
NGYEIASGGIRNHRPEAMVKAFEIAGYGEQEVIDRFGGMYRAFQYGAPPHGGMAAGVDRI
VMLLCGTTNLREISLFPMNQRAEDLLMGAPSEVSPKQLRELHIRLNLPDTK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgttatcgaacccatacctgcggcgcgctccgcgacagccatatcgaccagacc
gttcgcctgtccggctggtgccaccgcattcgcgaccatggcggcgtgctgttcatcgat
ctgcgcgaccattacggcattacccaatgcgtcgccgatccagattccccggcgttcaag
gacgccgaaaagctccgcgccgaatgggtggtgcggatggacggccgtgtccgtcgtcgc
cccgagggcaccgagaatcccgacctgccgaccggcgcggtcgaagtgttcgtgaccgag
atagaagtgctcggcccggcgggcgaactgccgctgccggtgttcggcgagcaggaatac
ccggaagacgtgcgcctgcgttatcgtttcctcgacctgcgccgcgagaagctgcaccag
aacatcatgacgcgtggcgccatcgtcgactcgatgcgccggcggatgaaggagcagggc
ttcttcgaattccagaccccgatcctgacggcgtcgtcgccggaaggcgcgcgcgacttc
ctggtgccgagccgcatccatcccggcaagttctacgcgctgccgcaggccccgcagcag
tacaagcagctgctgatgatgtcgggcttcgaccgctacttccagatcgcgccgtgcttc
cgcgacgaagacccgcgcgccgaccgtctgccgggcgaattctatcagctcgacgtcgag
atgagcttcgtcacccaggacgacatcttcgccgcgatggagccggtcatcaccggtgtg
ttcgaggaattcgcgaagggcaagcgcgtcaccaagggctggccgcgcatcgcgttcgcg
gactcgatgcgcaagtacggcaccgacaagccggacctgcgcaatccgatcgagatgcag
gacgtctccgagcatttccgtggctccggcttcaaggtgttcgcgcgcatgctcgaagag
cagcgcaaccaggtctgggcgatcccgggtcccggcggcggctcgagagcgttctgcgat
cgcatgaattcgtgggcgcagggtgaaggtcagcccggcctcggctacatcatgtggcgc
gaaggcggcgagggcgccggtcctttggcgaacaacatcgggccggagcgcaccgaagcg
atccgcgccgcgctcggcctcaaggccggcgatgccgcgttcttcgtggccggcgatcca
tccaagttcgtcaagttcgccgggctcgcgcgcaccaaggtcggtgaggaattgaacctg
atcgacaaggatcagttctcgctcgcctgggtcgtcgacttcccgatgtacgagtacaac
gaggacgacaagaaggtcgacttttcgcacaacccgttctcgatgccgcagggtggcttg
gatgcgctgacgtcgcaggatccgctgaccatcaaggcgttccagtacgacatcacctgc
aacggctacgagatcgcctcgggcggcatccgcaaccatcgccccgaggcgatggtgaag
gcgttcgagatcgcgggctacggcgagcaggaagtgatcgaccggttcggcggcatgtac
cgtgccttccagtacggcgctccgccgcatggcggcatggcggccggcgtcgaccgcatc
gtgatgctgctgtgcggcaccaccaacctgcgcgaaatctcgctgttcccgatgaaccag
cgtgccgaagatctgctgatgggtgcgccgtccgaggtgtcgcccaagcaacttcgcgaa
ctgcacatccggctcaatctgcccgacactaagtaa
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