Rhodopseudomonas sp. P1: LRC39_15880
Help
Entry
LRC39_15880 CDS
T11217
Name
(GenBank) IPT/TIG domain-containing protein
Organism
rhoe Rhodopseudomonas sp. P1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIG
Motif
Other DBs
NCBI-ProteinID:
XAT75811
LinkDB
All DBs
Position
3428324..3432853
Genome browser
AA seq
1509 aa
AA seq
DB search
MAFSATCTAAGSPTVTSVSPSSGTTGGGTSVTINGTNFTGATSVRFGSNSVPSSSFTSSS
PTQIVVPSPSGSAGTVHITVTNGVGTSATSSSDQFTYVAPPTISSISPSSGSTAGGTAVT
IGGTNLSGVTSVTVGGASATLGTNTSTSISITTPAGTAGARDVVVTTAGGSATSTGGFTY
VSPPAVTGISPTSGPATGGTSVTITGTNFSGATSVSFGSNSVASGGFTSSSSTQIVVPSP
SGSAGTVHVTVTTPIGTSATSSSDQFTYIAAPTITGISPSSGPTGGATSVTISGTNLSGV
TSVTVGGASATLGTNTSTSIVITTPSGTAGARDVVVTTAGGSATATGGFTYVAPPSIGSI
SPGSGPATGGTSVTISGTNLSGVTSVTVGGASATLGTNTSTSIIITTPSGTAGARDVVVT
TAGGSTTSTGGFTYIAGPTIGSISPSAGPTAGGTSVTISGSNLSGVTSVTVGGAAATLGT
NTATSIVITTPSGTAGARDVVVTTPGGAATSTGGFTYAAAPTISTISPNSGSTGGGTSVT
ISGTNLSGVTAVTIGGASATLGTNTSTSIVVTTPSGTAGARDVVLTTPGGSVTATGGFTY
ILSPSISSISPNAGPTAGGTSVTITGTNLAGVTGVTIGGSPATVGTNTSTSVVVTTPAGT
AGARDVVVTTGGGSATATGGFTYAGPPTISTISPNSGSTSGGTSITISGSNLANVISVSI
GGTAASLGTNTSTSIVVTTPSGTAGARDVVVTTAGGSVTSTGGFTYVAPPTISSISPSSG
PAAGGTSVTITGTNLSGVTSVTVGGAAATLGTNTATSIAITTPAGTSGARDVVVTTAGGP
VTSTGGFTYIAAATVTAIAPAAGPIGGGTSVTITGTNLTGATAVTIGGVAATSITIVNAT
TITATTPAHAAGSVDIVVTTPGGTATGTGLYSYVAGPSVTSISPASGPGAGGTSVTITGS
NLAGATAVSFGGTAATAVSVTSATTITATTPAHAAGVVDVTVTTPGGSSTGAGLFSYIVT
TTTTTLTSSRNPSEAGQPVSFTATVTASGSVPTGTVTFTDSGVTIGSVALSGGTATLTTS
SLTVGSHTILAAFIGNASYSPSSSSPLLQAVNTPQDSLKLRAMQIIASKTIAQTSGAVIS
GAIDSAISEGFNDGGELVAPSGTGLRFNFTDDPSQSRTGAADSAVESSWPRSYVRDNGPG
RSIGFGIGDPTGPGRSRSRFDDTFAAIDRKADITKAPAKAQVEPKDWLMWAEVKATGIGQ
WNASSTSSVLSGNQVNALIGLTRKPIPDFLIGLVGGYESFDYKSGTLDGRLKGDGWTIGS
YAAWRSAAGLRFDIAGAYSGIGYDGSAGSAFGSFDGRRWLVSGGITGTTEALGFAIEPSA
KLYALWERQNAYIDSLGTPQAQREFFTGRASAGLKVSYPWIYSATLTLAPYTGVFADYYF
LGDNAETITLASGAPLASVPLMDGWSARLTGGIAARFSNGAAVAVGGELGGLGGTVQIWT
LRGRASVPF
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttctcagccacctgcaccgcggccggcagtccaacggtcacgtcggtatcgccg
tcgtccggaacgaccggcggcggcacttcggtgaccatcaacggcacgaacttcaccggg
gcgacgtcagtgcgcttcggctcgaactcggtaccgagcagcagcttcaccagcagttca
ccgacccagatcgtcgtgccctcgccgagcggcagcgccggcacggtgcatatcacggtg
acaaacggagtcggcacctcggcgacgagttcgagcgaccaatttacctatgtggcacct
ccgacgatcagctcgatctcgccgagttcaggctcgaccgcgggcggcactgcggtgacg
atcggcgggacgaacttgtccggcgtcacctcggtgaccgtcggcggcgcctcggcgacg
ctcggcaccaatacgtcgacctcgattagtatcaccaccccggctggcaccgcaggcgca
cgcgacgtcgtcgtgacaaccgcgggtggctccgctacgtcgaccggcggtttcacctat
gtgtccccccctgcagttaccggtatctcgccgacgtccggtccagccacaggcggcacc
tcggttaccatcacaggcacgaacttcagcggcgcaacctcggtcagcttcggctcgaat
tcggtggcgagtggcggcttcaccagcagttcgtcaacccagatcgtcgtcccctcaccg
agcggcagcgccgggaccgtgcacgtcaccgtgaccacgccgatcgggacatcggcgacc
agctcgagcgaccagttcacctacatcgccgccccgaccatcacaggcatttcgccaagt
tccggtccgaccgggggcgcgacgtcggtgacgatcagcggtaccaatctgtcaggcgtc
accagcgtcacagtcggcggtgcatcggcaacgctcggcaccaacacatcgacgtcgatc
gtcatcacgacgccgtccggcacggccggcgcacgcgacgtcgttgttaccaccgcaggc
ggatcggcgaccgcgaccggcggcttcacctatgtagccccaccgagcatcggttcgatt
tcgccgggttcgggcccggccaccggcggcacgtcggtaaccatcagcggcaccaacctg
tccggcgtcaccagcgtgacggtgggcggggcgtcggcgacgctcggcaccaacacatcg
acttcgatcatcattaccacgccgtccgggacggctggcgcgcgcgacgtggtggtgaca
acggccggcggctcaaccacctcgaccggcggcttcacctacatcgccggcccgaccatc
ggttcgatttcacccagtgcgggcccaactgcgggcggcaccagcgtcaccatctcgggc
agcaatctgtccggtgtcacgagcgtgactgtcggcggcgctgcggcgaccctgggcacc
aatacggcgacgtcgatcgtcatcaccacgccgtccggaacggccggggcacgagacgtc
gtcgtcaccacgcccggtggcgcggcgacatcgaccggcggcttcacctacgcggcggcg
ccgacgatcagcacgatctccccgaattccggttccaccggaggcggcacctcggtgacg
atcagcggcaccaacctgtccggagtgaccgccgtcaccatcggcggcgcatccgcgacc
ctcggcaccaatacatcgacgtcgatcgttgtgacgacgccgtccgggacggccggagca
cgtgatgttgtcctgaccaccccgggcggttcggtcacagcgaccggcgggttcacctac
atcctgtcaccgtcgatcagctcaatctcgccgaacgccggcccgacggcgggcggcacg
tcggtgacgatcaccggcaccaatctggccggggtcaccggggtgacgatcggcggctca
cccgccacagtcggcaccaatacgtccacctcggtcgtcgtgaccacgccggccggcaca
gccggggcgcgcgacgtcgttgtcacgaccggtggcggctcggccacggccaccggcggc
ttcacctacgcgggcccgccaacgatcagcacgatctctcccaactccggctcgaccagc
ggcggcacctccatcaccatctccggcagcaatctcgccaacgtcatttcggtcagcatt
ggcggcactgcggcctcgctcggcacgaacacatccacatcgatcgtggtgacgacaccg
agcggaacggccggcgcacgcgacgtcgtcgtgacgaccgccgggggatcggtgacatcc
accggcggcttcacctatgtggcgcccccgaccatcagctcgatctcgccgagctcaggc
ccggctgccggcggcacatcggtgaccatcaccggcaccaacctgtccggcgtcacctcg
gtgacggtcggcggagcggccgcgacccttgggacgaacacggcgacctcgatcgcgatc
acgacacctgccggtacctcgggcgctcgggatgtcgtcgtcaccaccgccggcggcccg
gtcacgtcgactggcggtttcacctatatcgcggccgccacggtgacggcgatcgctccc
gccgcgggcccgatcggcggcggcacgtcggtcaccatcaccgggacgaacctcaccggg
gcgacggccgtaacgatcggtggggttgcggccaccagcatcacgatcgtgaatgccacc
acgatcacggcgaccacgcccgctcacgctgcgggcagcgtcgacatcgtggtgacgacg
cccggcggcaccgcgacggggaccgggctctacagctacgtcgccggtcccagcgtcacg
tcgatcagtccggcgagcggccccggcgcgggcggcacctcggtgacgatcaccggcagc
aacctcgctggcgcaaccgccgtcagcttcggcggcaccgcggccaccgccgtgagcgtg
accagcgccaccaccatcaccgcaacgacgcctgctcatgccgcgggcgtggtcgacgtc
accgtgacgacaccgggcggcagcagcaccggggccggcttattcagctatatcgtcacc
acgacaaccactaccctcacctcgtcgcgcaaccccagcgaagcgggacagccggtcagc
ttcaccgcgacggtgacggcgagcggctccgtcccgaccggcaccgtgaccttcaccgac
agcggcgtcacgatcggctcggtcgctttgtccggcggcaccgcgacgctcaccaccagc
agcctgacggtcggctcacataccattctggccgcgttcattggcaacgccagctattcc
cccagtagctcgtcgccgctgctgcaagccgtcaacacaccccaggacagtctcaagctg
cgcgccatgcagatcatcgcgagcaagacaatcgcgcagacctccggcgccgtgatctct
ggggcgatcgactctgcgatttccgaggggttcaacgacggcggcgagttggtcgcacca
tccggcacgggcctccgcttcaacttcaccgacgatccgtcgcagagccgaaccggggcg
gccgacagcgccgtcgagagcagctggccaaggtcatacgtccgcgacaacgggcccggc
cgtagcatcggattcggcatcggcgatccgaccgggccgggacgaagccgatcccgcttt
gacgacaccttcgcggcgattgatcgcaaggccgacatcacaaaggcacccgcgaaggca
caggtcgagccgaaggattggctgatgtgggctgaggtgaaagcgaccggcatcgggcaa
tggaacgccagcagcaccagctcggtgctcagcggaaaccaggtcaatgcattgatcgga
ctgacccggaagccgattccggacttcctgatcggcctcgtcggtggttacgagagcttc
gactacaagtccggtacgctcgacggcaggctcaaaggcgatggctggacgatcggctcc
tacgcggcgtggcggtccgccgccgggctgcgcttcgacatcgccggcgcctattcgggg
atcggttacgacggctcggccggcagcgccttcggcagcttcgatggccggcggtggctg
gtgtctggcggcatcaccggcaccacggaggcgttgggtttcgcgatcgagccctcggcg
aagctctatgcgctgtgggagcgccaaaacgcctacatcgattcacttggcactccgcag
gcgcagcgcgagttcttcaccgggcgggcatcggccggcctcaaggtcagttacccctgg
atctacagcgcgacgctgacgctcgcgccctacaccggcgtgtttgccgactactacttc
ctcggcgacaacgcggagacaatcacgctcgcgagcggagcgccgctggcttcggtgccg
ctgatggacggctggtcggcacggttgaccggaggcatcgcagcgcggttcagcaacggc
gcggcggtcgcggtcggcggcgaactcggcggcctgggcggcaccgtccagatctggacg
ctccgcggccgggcatccgtgccgttctga
DBGET
integrated database retrieval system
