Rhodopseudomonas sp. P1: LRC39_16305
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Entry
LRC39_16305 CDS
T11217
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhoe Rhodopseudomonas sp. P1
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoe03400
]
LRC39_16305
Enzymes [BR:
rhoe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LRC39_16305
DNA repair and recombination proteins [BR:
rhoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LRC39_16305
Prokaryotic type
LRC39_16305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XAT71821
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Position
3515817..3517268
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AA seq
483 aa
AA seq
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MLTTSSSRPVIVWFRDDLRLADHPALQAAAQSGAAVLGVYVLDEVSDDVRPHGGAARWWL
GQSLRSLEAELAAAGAPLILRRGPAAAVLAELAQQSDAAAVHWNEIEIAPHRAVADALAD
ALTVAGIAYHRHPGDTLVAPSAIRSKDGRGMRVFTPFWRRVLSLGDPPQPLPRPKALRPA
PAPPSDQLGDWQLEPTAPDWAGGLRQTWTPGEAAAQARLSGFLAGLPGYADGRDYPDRHV
TSGLSPHLRFGEISPRQVWYAARFAAAERPAIAPDIDKFLSELGWREFCRHLLFDHPDLA
TRNLQPAFDAFPWHSDEAALSAWQRGRTGYPIVDAGMRELWHSGVMHNRVRMVVGSFLVK
HLLIDWRLGEQWFWDTLVDADPGSNPGNWQWVAGCGADAAPYFRVFNPLLQSEKFDAGGS
YIRRWVPELACLPDNLIHQPWTATPLELAAAGIELGGNYPRPIVDHKTGRQRALSAYAEL
RQR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacaacctccagctcccgacccgtcatcgtctggtttcgcgacgatctccgtctt
gccgatcatccggcgttgcaggcggctgcacaatccggtgcggctgtgctgggcgtttat
gtgctcgatgaggtgagcgatgatgtgcgcccccacggcggcgcagcgcggtggtggctg
gggcaatcgctgcgctcgctcgaagctgagcttgccgcggccggcgcgccgctgatcctg
cgacgcgggccggcggccgcggtgctggccgagctggcgcagcagagcgatgcggcggcg
gtgcattggaacgagatagagatcgctccacatcgggctgtcgccgatgcgctggccgat
gccctcacggtggccggcatcgcgtatcaccgccaccctggcgacacgctggtggcgccg
agtgcgatccgcagcaaggatggccgcggcatgcgggtgttcacgccgttctggcggcgc
gtcctcagcctcggcgatccaccgcagcccctgccccgcccgaaggcgctgcgcccggcg
ccggctccaccgagcgaccagctcggcgactggcagctcgagccgacggcgccggactgg
gccggcggcctccgccaaacctggacgccgggcgaagccgccgcacaggcgcggctatcc
ggcttcctcgcgggcctgcccggctatgcggacgggcgcgactatccggatcggcacgtc
acctccggcctgtcgccgcatctgcggttcggcgaaatcagtccgcgccaggtctggtac
gccgcgcgctttgccgccgccgagcggccggcgatcgcgcccgacatcgacaaattcctg
agcgagctcggctggcgcgagttctgccggcatctgctgttcgaccatccggatctggcg
acccgcaatctgcagccggcgttcgacgccttcccgtggcacagcgacgaggcggcgctc
agcgcctggcagcgcggccgcaccggctacccgatcgtcgacgccggaatgcgcgagctg
tggcactccggggtgatgcacaatcgcgtccgcatggtcgtcggctcgttcctggtcaag
cacttgctgatcgactggcggctcggcgagcagtggttctgggacacgctggtcgacgcc
gatcccggcagcaatcccggtaactggcagtgggtggcgggctgcggcgccgacgcggcg
ccgtatttccgggtgttcaacccgttgctgcagagcgagaagttcgacgcgggcggcagc
tacatccggcgctgggtccccgagctggcctgcctgcccgacaacctgatccaccagccg
tggaccgcgacgccgctcgaactcgccgccgccggcatcgagctcggcggcaactatccg
cggccgatcgtcgaccacaaaaccggccggcagcgggcgctttcggcctacgccgagctg
cgtcagcgttga
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