Rhodopseudomonas sp. P1: LRC39_17745
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Entry
LRC39_17745 CDS
T11217
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00061
Fatty acid biosynthesis
rhoe00071
Fatty acid degradation
rhoe01100
Metabolic pathways
rhoe01212
Fatty acid metabolism
rhoe02024
Quorum sensing
rhoe04146
Peroxisome
Module
rhoe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LRC39_17745
00071 Fatty acid degradation
LRC39_17745
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LRC39_17745
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRC39_17745
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhoe01004
]
LRC39_17745
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoe04147
]
LRC39_17745
Enzymes [BR:
rhoe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LRC39_17745
Lipid biosynthesis proteins [BR:
rhoe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LRC39_17745
Exosome [BR:
rhoe04147
]
Exosomal proteins
Exosomal proteins of breast milk
LRC39_17745
Exosomal proteins of breast cancer cells
LRC39_17745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
XAT72095
LinkDB
All DBs
Position
complement(3828176..3829702)
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AA seq
508 aa
AA seq
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MNLAEWLAASARLRPGAPALLTGTTVDADYATFASRAASFGAALARDYGIAPGDRVALFA
HNCTRYLEALYGIWWAGAVAIPINAKLHGKEVAWICSNAEARLALICDDTADTFNEASCD
LPPGMAVLAIDSDGYDRARSREGAKAPVARDDHDLAWLFYTSGTTGRPKGVMLSHGNLVA
MSLSYLADVDAVTPEDAALYAAPISHGAGLYNMIHVRFGARHVVPESGGFDPDEVLSLGK
QLGNVAMFAAPTMIKRLVDAAKRRGETGEGLRTIVYGGGPMYLADIREALSVMGQRFVQI
YGQGESPMTITSLKRALHADVDHPRYLQRLASVGTAQSVVSVRITGANGEVLPPGETGEI
EVKGSTVMLGYWNNPQANAETLKDGWLRTGDVGRLDDDGFLTLSDRSKDVIISGGTNIYP
REVEEALLTHPAVREVSAIGVADPEWGENVVACVVLADDAAADDATLDAHCLATIARFKR
PKRYVYLDALPKNNYGKVLKTELRKIVK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggcggaatggcttgctgcgagcgcccggctacggccgggcgctccggcgctg
ctgacgggcaccacggtcgatgccgactacgcgacgttcgcgtcgcgtgcggcatcgttc
ggagcggcgctggcgcgcgattacggcatcgcgcccggcgatcgcgtcgcgttgttcgcg
cataactgcacgcgctatctcgaggcgctgtacggcatctggtgggcgggcgcggtggcg
atcccgatcaacgccaagctgcacggcaaggaggtcgcctggatctgcagcaacgcggaa
gcaagactcgcgctgatctgcgacgacaccgccgacaccttcaacgaagcctcctgcgat
ctgccgcccggcatggcggtgctggcgatcgacagcgacggttacgaccgtgcccgcagc
cgcgagggggccaaggcaccggtcgcgcgcgacgatcacgatctcgcctggctgttttac
acttccggcaccaccggccggcccaagggcgtgatgctcagccacggcaatctcgtggcg
atgtcgctgagctatctggccgacgtcgacgcggtgacgccggaggatgcggcgctgtat
gccgcgccgatctcgcacggcgccgggctctacaacatgatccacgtccggtttggcgcg
cggcatgtcgtgccggagtccggcgggttcgatccggacgaggtgctcagcctcggcaag
cagctcggcaacgtcgcgatgttcgccgcgccgaccatgatcaagcgcctggtcgatgcc
gccaagcgccgcggcgagaccggcgaggggctgcgcaccatcgtctatggcggcggcccg
atgtatctcgccgacatccgcgaggcgctgagcgtgatgggccaacgcttcgtacagatc
tacggccagggtgaatcgccgatgacgatcacctcgctgaagcgcgcgctgcacgcggac
gtcgatcatccgcgctatctgcagcggctcgcctcggtcggcaccgcgcagagcgtggtg
tcggtgcggatcaccggcgcgaacggcgaagtgctgccgccgggcgagaccggcgagatc
gaggtcaagggctcaaccgtgatgctcggctattggaacaatccgcaggccaatgccgag
acgctgaaggacggctggctgcgcaccggcgatgtcgggcgtttggatgacgacggcttc
ctgacgctgtcggaccgctccaaggacgtgatcatctccggcggcaccaatatctatccg
cgcgaggtcgaggaggcgctgctgacgcatccggctgtgcgcgaggtctcggcgatcggg
gtggccgatccggaatggggcgagaacgtcgtcgcctgcgtcgtgctcgccgacgacgcc
gcggccgacgacgccacgctcgacgcccactgcctcgccaccatcgcccgcttcaagcgc
cccaagcgctacgtctatctcgacgcgctgccgaagaacaattacggcaaagtgctgaag
acggagctgcggaagatcgtgaagtaa
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