Rhodopseudomonas sp. P1: LRC39_17820
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Entry
LRC39_17820 CDS
T11217
Name
(GenBank) TonB-dependent receptor
KO
K16090
catecholate siderophore receptor
Organism
rhoe Rhodopseudomonas sp. P1
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhoe02000
]
LRC39_17820
Transporters [BR:
rhoe02000
]
Other transporters
Pores ion channels [TC:
1
]
LRC39_17820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Inhibitor_Mig-6
Motif
Other DBs
NCBI-ProteinID:
XAT72110
LinkDB
All DBs
Position
complement(3845540..3847921)
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AA seq
793 aa
AA seq
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MNGAKAPRSLRAEAALRTVSEFDGHHGRKVSAVAGMIAVASIGGAEAQQSSLPAVTVDAP
VARPKPAAARATPDQVRARTALRRAARRTQPTQVQPVPFPNAGTLSADRNPYADAAAPYK
VDRLSGTKFTEPVLNTPRTVTVLTKELLEDKNATSLREVARSTAGVTLGTGEGGNAFGDR
FFIRGFDARNDVFIDGIRDPAISIRENFFTEQVEILRGPASTMAGRGTAGGAINIVTKQA
TTEGNFTKAETTFGSDATKRVTVDVNQVLSPTLAVRVDGLYQDAKVAGRNYVTDDRWGTL
AAVKWTPTDAIKVTANYVHTDLDGLPDFGVPYNTALRRPSTDVNVPRETYYGFVNRDFQK
AKQDFGTVTGEFAITPDLTLTNRSRAAHSVLDYIGTLPSNPTATTVSLASQSRYQTTDVL
ANQTDLTYKFDVGGVKHTMVGGAEISRESVMRDTYAGLTSELAGFQSGGRITVPLLAPPN
LFEFATQPQRAYNPTFINVDTKSAYVIETANWNDVVILNGGLRYDDYNITGHTAATSTAV
QSGMWNYNLGAVVKPLPYASLYAAYATSTNPVGAELDASGTAYGGLVVNNATFQALPPEM
NKAAEVGTKWELFDRRLLLTASLFETQKSNARETVGNNILSTGVYRVRGIDLEASGKITD
RWSVFGGLVLMETKVLQSIDPNSVGAQLANIAHQSFNLLTKYKFDDHWEVGGQAVYASKI
YGGTFAAINGNVLPEHWRFDSFVEFKVDKHMTAKLSVNNIFNTTYYDAFYRSNSPFVFIA
PGRSVWLTLRGAL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggcaaaggcaccgaggtcgttgcgagcggaagcagcgcttcggacggtcagc
gaattcgacggccatcatggccgcaaggtgtcggcggtggccggcatgatcgcggtggcg
tcgatcggcggcgccgaagcgcagcagtcgagtcttccggcagtgaccgtcgatgccccg
gtggcacggccgaaaccggctgcggcgcgcgcaacgcccgatcaggtacgtgcccgcacc
gcgctgcgccgggcggcgcgccgcacgcagccgacccaggtgcagccggtaccgtttccc
aatgccggcacgctgtcggcggatcgcaacccctatgcggatgcggccgcgccctacaag
gtcgaccggctgtccggcaccaagttcaccgagccggtgctcaacaccccccgcaccgtg
acggtgctgaccaaggaactgctcgaagacaagaacgcgacctcgctgcgcgaagtggcg
cgttccaccgccggcgtcacgctcggcaccggggagggcggcaacgcgttcggtgaccgc
ttcttcatccgcggcttcgatgcccgcaacgacgtgttcatcgacggtatccgcgatccg
gcgatctcgatccgcgagaatttcttcaccgagcaggtcgagatcctgcgtggcccggcc
tcgaccatggcgggccgcggcaccgcgggtggtgccatcaacatcgtcaccaagcaggcg
accaccgaaggcaatttcaccaaggccgaaaccacgttcggctccgacgccaccaagcgc
gtcacggtggacgtcaaccaggtgctgagcccgacattggcggttcgtgtcgacggtctg
taccaggatgccaaggttgccggtcgcaactacgtcaccgacgaccgctggggcacgctg
gccgcggtgaagtggacgccgaccgacgccatcaaggtcaccgccaactacgtccacacc
gatctcgacggcctgccggatttcggcgtgccgtacaacaccgcgctgcgccggccgtcg
accgacgtcaacgtgccgcgcgaaacctattacggcttcgtcaatcgcgacttccagaag
gccaagcaggatttcggcacggtcaccggcgagttcgcgatcacgccggacctgaccctg
accaaccgctcgcgcgccgcgcattcggtgctcgactatatcggcacgctgcccagcaat
ccgaccgccaccacggtctcgctggcgtcgcagagccgctatcagaccaccgacgtgctc
gccaatcagaccgacctgacctacaagttcgacgtcggcggggtgaagcacactatggtc
ggcggtgccgaaatctcgcgtgaaagcgtgatgcgcgacacttacgcgggcctcacctcg
gagctcgccggcttccagagcggcggccgcatcaccgtgccgctgctggcgccgccgaac
ctgttcgagttcgccacccagccgcagcgcgcctacaacccgaccttcatcaacgtcgat
accaagtcggcctatgtgatcgagaccgccaactggaacgacgtcgtcatcctcaacggc
ggcctgcgctacgacgattacaacatcaccggacacaccgcggcgacctccaccgcggtg
cagtcgggaatgtggaactacaatctcggtgcggtggtgaagccgctgccttacgccagc
ctgtacgcggcctacgcgacatcgaccaacccggtcggtgccgaactcgacgcctcgggc
accgcttacggcggcctcgtcgtcaacaacgccaccttccaggcgctgccgccagaaatg
aacaaggcggcggaagtcggcaccaaatgggagctgttcgatcgccggctgctattgacc
gcgtcgctgttcgaaacccagaagtcgaacgcccgcgaaaccgtcggcaacaacatcctg
tcgaccggcgtctatcgggtccgcggtatcgacctcgaagcctccggcaagatcaccgac
cgctggagcgtgttcggcggcctggtgctgatggaaaccaaggtgctgcagtcgatcgat
ccgaattcggtcggcgcgcagctcgccaacatcgcgcaccagtcgttcaacctgctcacc
aagtacaagttcgacgaccattgggaagtcggcgggcaggcggtgtacgcctccaagatc
tacggcggcacctttgcggcgatcaacggcaacgtgctgcccgagcactggcggttcgac
agttttgtcgaattcaaagtcgacaaacacatgaccgccaagttgtcggtcaacaacatc
ttcaacaccacctattacgacgcgttctatcgttcgaactcgccgttcgtattcatcgcg
ccgggtcgttcggtctggctgacgctacgcggcgcgctgtaa
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