Rhodopseudomonas sp. P1: LRC39_18130
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Entry
LRC39_18130 CDS
T11217
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00470
D-Amino acid metabolism
rhoe00550
Peptidoglycan biosynthesis
rhoe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRC39_18130 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LRC39_18130 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhoe01011
]
LRC39_18130 (murD)
Enzymes [BR:
rhoe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LRC39_18130 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhoe01011
]
Precursor biosynthesis
Amino acid ligase
LRC39_18130 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
XAT72169
LinkDB
All DBs
Position
complement(3920300..3921709)
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AA seq
469 aa
AA seq
DB search
MIPVTSFAGQSVAVFGLGGSGLASCHALKAGGAEVIACDDNLDRMVEAAQAGFITADLRN
LPWTNFAALVLTPGVPLTHPAPHWTVLKAQEAGVEVIGDVELFCRERKAHAPRAPFVAIT
GTNGKSTTTALIAHLLREAGWDTQLGGNIGTAILSLEPPKDGRVHVIEMSSYQIDLTPSL
DPTVGILLNVTEDHIDRHGTIEHYAAVKERLVAGVQDGGTSIIGVDDEFGRAAADRIERA
GKRVVRMSVQGPVTSGITADLQTIRRIDGGNSTEVAKLGGIGSLRGLHNAQNAAAAAAAV
LALGISPDVLQQGLRSFPGLAHRMEQVGRQVSEKGTTLFVNDSKATNADAAAKALSSFGE
IFWIAGGKPKTGGIESLAEYFPLIRKAYLIGQAAQEFAATLEGRVPYEISETLEVAVPAA
ARDAAASGLAEPVVLLSPACASFDQFRNFELRGTRFRELVTALEGVAAV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtcacctctttcgccggccagtcggtcgcggtgtttgggctcggcgggtcg
gggctggcgagctgccacgcgctgaaggctggcggcgccgaagtgatcgcgtgcgacgac
aatctcgaccgcatggtcgaggcggcgcaggccggcttcattaccgcggatctgcgcaat
ctgccttggacgaattttgccgcactggtgctgacgcccggcgtgccgctgacccacccg
gcgccgcattggacggtgctgaaggcgcaggaggcgggcgtcgaagtgatcggcgacgtc
gaactgttctgccgcgagcgcaaggcgcatgcgccgcgcgctcccttcgtcgcgatcacc
ggcaccaacggcaagtcgaccaccacggcgctgatcgcgcatctgctgcgcgaggccggc
tgggacacccagctcggcggcaacatcggcaccgcgatcctgtcgctcgaaccgccgaag
gacggccgcgtccacgtgatcgagatgtcatcgtatcagatcgacctgacgccgtcgctc
gatccgaccgtcggcatcctgctcaacgtcaccgaagatcacatcgaccgccacggcacc
atcgagcactacgctgcggtgaaggagcggctggtcgcgggcgtgcaggacggcggcacg
tcgatcatcggcgtcgacgatgagtttggccgcgccgcggcggaccggatcgaacgcgcc
ggcaagcgcgtggtgcggatgtcggtgcaggggccggtgacctccggcatcaccgccgat
cttcaaaccattcgccgcatcgacggcggcaattctaccgaagtcgccaagctcggcggt
atcggctcgctgcgcggtctgcacaatgcgcaaaacgcagcggccgcagcggccgcggtt
ctggcgctcggcatctcgcccgatgtgctgcagcagggcctgcgcagcttccccggcctc
gcacaccggatggagcaggtcggccgccaagtcagcgagaaggggacgacgttgttcgtc
aacgactccaaggccaccaatgcggatgcggccgcgaaggcgttgtcgtcgttcggtgag
atcttctggatcgccggcggcaagccgaagaccggcggcatcgagagcctggcagagtat
ttcccacttatccgcaaggcctatctgatcggccaggccgcgcaggaattcgccgccacc
ctggaaggccgggtgccgtacgagatcagcgaaacgctggaagtcgcggtgcccgccgcc
gcgcgcgatgccgcggcgtcgggattggccgagccggtggtgctgctgtcgccggcctgc
gcctcgttcgaccagttccgcaatttcgaactccgcggcacccggttccgtgagctggtg
acggcgttggagggtgttgcggcggtgtga
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