Rhodopseudomonas sp. P1: LRC39_18730
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Entry
LRC39_18730 CDS
T11217
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LRC39_18730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoe03400
]
LRC39_18730
DNA repair and recombination proteins [BR:
rhoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LRC39_18730
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
XAT72283
LinkDB
All DBs
Position
4052844..4053728
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AA seq
294 aa
AA seq
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MPRAYWKGTLKLSLVTCPVALYPATTSVEKTRFHMINAETGNRLKQQMIDEDTGEVVEKD
QKARGYEVRKGKYIEIEKDELEAVQIESTHTIDIDSFVPADEIDQRFLNHPYYIVPDGKA
GVDAFAVIRDAMKDKGRVALGRIVLTNREHVLAIEPFGKGLLATTLRYPYELRDADEYFD
GIKSPKISKDMIELAGHILETKAAHFDPKKFKDEYETALKALVKRKASGKSIKLPEPEEK
ESNVVSLMDALKQSLEGGKSGTKTGKAHGRRKASRSSRTTTKARRSNARQRKAG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgcctattggaagggcacgctgaagctgtccctcgtcacctgcccggtggcg
ctatatccggcgacgaccagcgtcgagaagacccgcttccacatgatcaatgcggaaacc
ggcaatcggctgaagcagcagatgatcgacgaagacaccggcgaggtggtcgagaaggat
cagaaggcccgcggctacgaggtgcgcaagggcaagtacatcgagatcgaaaaggacgaa
ctcgaagcggttcagatcgagagcacccacaccatcgacatcgacagcttcgtgccggcc
gacgaaatcgaccaacgcttcctcaatcatccgtactacatcgtgccggacggcaaggcc
ggcgtcgacgccttcgcggtgatccgcgacgcaatgaaggacaaaggccgcgtcgcgctc
ggccgcatcgtgctcaccaatcgcgagcatgtgctggcgatcgagccgttcggcaagggc
ctgctggcgaccacgctgcgctacccttacgagctgcgcgatgcggacgagtatttcgac
ggcatcaagtcgccaaaaatctccaaggacatgatcgaactcgccggccacatcctcgag
accaaggcggcacatttcgatcccaagaagttcaaggacgaatacgagaccgccctgaag
gcgctggtcaagcgcaaggcctccggcaagtcgatcaagctccccgaacccgaggagaaa
gagagcaacgtggtcagcctgatggatgcgctgaagcagagtctcgaaggcggcaaatcc
ggcaccaaaaccggcaaagcccatggccgccgcaaagcctcccgctcctcccgtaccacc
accaaagcccgccgctccaacgcaaggcagcgcaaggcggggtga
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