Rhodopseudomonas sp. P1: LRC39_19070
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Entry
LRC39_19070 CDS
T11217
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00061
Fatty acid biosynthesis
rhoe00071
Fatty acid degradation
rhoe01100
Metabolic pathways
rhoe01212
Fatty acid metabolism
rhoe02024
Quorum sensing
rhoe04146
Peroxisome
Module
rhoe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LRC39_19070 (pimA)
00071 Fatty acid degradation
LRC39_19070 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LRC39_19070 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRC39_19070 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhoe01004
]
LRC39_19070 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoe04147
]
LRC39_19070 (pimA)
Enzymes [BR:
rhoe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LRC39_19070 (pimA)
Lipid biosynthesis proteins [BR:
rhoe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LRC39_19070 (pimA)
Exosome [BR:
rhoe04147
]
Exosomal proteins
Exosomal proteins of breast milk
LRC39_19070 (pimA)
Exosomal proteins of breast cancer cells
LRC39_19070 (pimA)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XAT72347
LinkDB
All DBs
Position
complement(4123704..4125362)
Genome browser
AA seq
552 aa
AA seq
DB search
MSHPGEQYYPPGVRWDAPIARGTLPDLLARAAKDYASRPALEFRDRQITYTKLEAMAETA
AAALLAAGYGRDSSVALYIGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGA
RVLITTDSAALLPMAERFLAKGLLDRLIVCSDASWGESATPLAPVPSDPRVITYADFIKG
ASKPMAWPAIVPDDIALLQYTGGTTGLPKGAMLTHSNLTSAVSIYDVWGLVRANSGGIHR
VICVLPLFHIYALTVILLRCLKQGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIAL
ANDPSLEKRDLSSLTMAGSGGAPLPVEVARLFERKTNLKLKSGWGMTETCSPGTGHPPEG
PDKPGSIGLMLPGIELDVVALDDPKRVLPPGEVGELRVRGPNVTKGYWNRPEESAHSFVG
DRFLTGDIGYMDQDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPAVQEVIVIGVPDD
YRGEAAKAFVKLRDGAQPFSIDELRAFLTGKLGKHELPTAVEFLDELPRTTVGKLSRHEL
RSQQTTTKTQTK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcccggtgagcagtactatccgcctggcgttcgctgggatgcgccaatcgcg
agggggacgttgccggatctgctggcgcgggccgcgaaggactatgcgtcgcggccggcg
ctggagtttcgtgatcggcagatcacctacaccaagctcgaagcgatggccgagaccgcg
gcggccgcgctgctcgcagcaggctatggccgcgactcctcggtcgcgctgtatatcggc
aacactccggaccatccgatcaatttcttcggcgcgctgaaggccggcgcccgcgtggtg
catctgtcgccgctcgatggcgagcgggcgctgtcgcataagctcagcgactccggcgca
cgcgtactgatcaccaccgattccgccgcactgctgccgatggccgagaggtttctcgcc
aaggggctgctcgaccgcctgatcgtatgcagcgatgcgagctggggcgagtcggccacg
ccgctggcgccggtgcccagcgatccgcgggtgattacttacgccgatttcatcaagggc
gcctccaagcccatggcctggccggcgattgtgcctgacgacatcgcgctgctgcaatac
accggcggcaccaccggcctgccgaagggcgcgatgctcacccattccaacctgacctcg
gcggtgtcgatctacgacgtctggggtctggtgcgcgccaatagcggcggcattcatcgc
gtgatctgcgtgctgccgctgttccacatctacgcgctcaccgtgatcctgctgcgttgc
ctgaagcagggcgatttgatctcgctgcatcagcggttcgacgtcgccgcggtgttccgc
gacatcgaggagaagcgcgccaccgtgttcccgggcgtgccgacaatgtggatcgcgctc
gccaacgatccgtcgctggagaagcgcgatctgtcgtcgctgacgatggccggctccggc
ggcgcgccgctgccggtcgaggtcgcgcggctgttcgagcgcaagaccaatctgaagctg
aagagcggctggggcatgaccgagacctgctcgcccggtaccggccatccgccggaaggg
ccggacaagccgggctcgatcggcctgatgctgccgggcatcgaactcgatgtcgtcgcg
ctcgatgatccgaagcgcgtgctgccgccgggcgaagtcggcgagctccgcgtccgcggc
ccgaatgtcaccaagggctattggaaccggccggaggagtccgctcacagtttcgtcggc
gaccgttttctcaccggcgacatcggctatatggaccaggatggctacttcttcctggtc
gaccgcaagaaggacatgatcatctccggcggcttcaacgtctatccgcagatgatcgag
caggcgatctacgaacaccccgcggtccaggaagtgatcgtgatcggcgtgccggacgat
taccgcggcgaggcggcaaaagccttcgtcaagctgcgcgacggggcgcagccgttcagc
atcgacgagctgcgcgccttcctcaccggcaagctcggcaagcatgaattgccgaccgcc
gtggagtttctcgacgaactgccgcgcaccacggtgggcaaactgtcccgccacgaattg
cgcagccagcagaccaccaccaagacgcagaccaagtaa
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