Rhodopseudomonas sp. P1: LRC39_20820
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Entry
LRC39_20820 CDS
T11217
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe00220
Arginine biosynthesis
rhoe00240
Pyrimidine metabolism
rhoe00250
Alanine, aspartate and glutamate metabolism
rhoe01100
Metabolic pathways
rhoe01110
Biosynthesis of secondary metabolites
rhoe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LRC39_20820 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LRC39_20820 (carB)
00220 Arginine biosynthesis
LRC39_20820 (carB)
Enzymes [BR:
rhoe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LRC39_20820 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
MucBP_2
Motif
Other DBs
NCBI-ProteinID:
XAT72683
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Position
4518778..4522107
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AA seq
1109 aa
AA seq
DB search
MPKRTDISTILIIGAGPIVIGQACEFDYSGTQAVKALKQEGYRVVLVNSNPATIMTDPEL
ADATYIEPITPEIVAKIIEKERYVIPGGFALLPTMGGQTALNCALSLRKLGTLEKFDVEM
IGATADAIDKAEDRERFREAMTKIGLETPNSRQVKSLPDALRALDEIGFPALIRPSFTMG
GTGGGIAYTKAEFIEIVERGIDASPTNEVLIEESILGWKEYEMEVVRDKHDNCIIVCSIE
NLDPMGVHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVETGGSNVQFAVNPDDGRL
VVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYSLDEIANDITGGATPASFEPTIDYV
VTKIPRFAFEKFPGASANLTTAMKSVGEVMAIGRTFQESLQKALRGLESGLTGLDEIEIE
GLGRGDDKNAIRAALGTPTPSRLLQVAQAMRLGWSDEEIFNSCKIDPWFLAQLRGIVDME
ARVRDAGLPDHSFGMRTLKAMGFSDARLAVLANTTEAEVKDKRRALGVRPVFKRIDTCAA
EFASPTAYMYSTYEAPFAGPASDESRPSDKQKVIILGGGPNRIGQGIEFDYCCCHACFAL
HDAGYESIMVNCNPETVSTDYDTADRLYFEPLTAEDVLEIIDTERSNGTLRGVIVQFGGQ
TPLKLARALEAADVPILGTSPDAIDLAEDRDRFKRILDKLRLKQPKNGIAYSVEQARLVA
AELGLPLVVRPSYVLGGRAMQIIREDNQLSDYLLGTLPELVPGDVKARYPNDKTGQINTV
LGTNPLLFDRYLSDATEVDVDCLSDGKDTFIVGIMEHIEEAGIHSGDSACSLPPHSLSAE
TIAELERQTRELALGLDVVGLMNVQYAIKDGEIYVLEVNPRASRTVPFVAKVIGMPVAKL
AARIMAGEKIADLGLKKRTLDHVGVKESVFPFARFPGVDTVLGPEMRSTGEVMGLDRSFE
VAFAKSQLGGGTRVPRKGTVFVSVRESDKARILDAVKLLHSVGFRVIATSGTQRYLADHG
VPAEKINKVLEGRPHIVDAIMNGEVQLVFNTTEGPQALADSRSLRRAALLHKVPYYTTLS
GAVAAAKGIRAYLDGDLEVRTLQSYFSES
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgaaccgacatctccaccatcctcatcatcggggccggtcccatcgtgatc
ggccaggcctgcgaattcgactattccggcacgcaggcggtcaaggcgctgaagcaggag
ggctatcgggtcgtcctggtcaactccaatccggcgacgatcatgaccgatccggagctg
gcggacgcgacctatatcgagccgatcacccctgagatcgtcgccaagatcatcgaaaag
gagcgctacgtcatccccggcggcttcgcgctgctgccgacgatgggcggccagaccgcg
ctgaactgcgcgctgtcgttgcgcaagctcgggacgctggagaaattcgacgtcgagatg
atcggcgccaccgccgacgccatcgacaaggccgaggaccgcgagcggttccgcgaggcg
atgaccaagatcgggctcgaaaccccgaactcgcgccaggtgaagagcctacccgacgcg
ctgcgcgcgctcgacgagatcggcttcccggcgctgatccggccatcgttcacgatgggc
ggcaccggcggcggcatcgcctacaccaaagccgagttcatcgagatcgtcgagcgcggt
atcgacgcctccccgaccaacgaggttctgatcgaagaatcgatcctcggctggaaggaa
tacgagatggaggtcgtgcgcgataagcacgacaactgcatcatcgtctgctcgatcgag
aatctcgacccgatgggcgtgcacaccggcgattcgatcaccgtggcgccggcgctgacc
ctgaccgacaaagaataccagatcatgcgcgacgcctcgctggcggtgctgcgcgagatt
ggggtggagaccggcggctccaacgtgcagttcgcggtcaacccggatgacggccggctg
gtcgtgatcgaaatgaacccgcgggtgtcgcgttcgtcggcgctggcgtcgaaagccacc
ggcttcccgatcgccaaggtcgccgccaagctggcggtcggctattcgctcgacgagatc
gccaacgacatcaccggcggcgcaacgccggcgtcgttcgagccgacgatcgactatgtc
gtcaccaagattccgcggttcgccttcgagaaattccccggcgcctccgccaacctgacc
accgcgatgaagtcggtcggcgaggtgatggcgatcggccgcaccttccaggagagcctg
cagaaggcgctccgcggcctcgagagcggcctcaccggtctcgacgagatcgagatcgaa
ggtctcggccgcggcgacgacaagaacgcgattcgcgcggcgctcggcaccccgacgccg
agccggctgctgcaggtcgcgcaggcgatgcgcctcggctggtcggacgaagaaatcttc
aactcctgcaagatcgacccctggttcctggcgcagctccgcggcatcgtcgacatggag
gcccgggtccgcgacgcgggcctgccggatcactcattcggcatgcgcaccctgaaggcg
atgggcttctccgacgcccgcctcgccgtgctggccaacaccaccgaggccgaggtcaag
gacaagcgccgtgcgctcggcgtccgcccggtgttcaagcgcatcgacacctgcgcggcg
gagttcgcctcgccgaccgcctacatgtattcgacctacgaggcgccgttcgccggcccc
gcgtcggacgaaagccggccgtcggacaaacagaaggtgatcatcctcggcggcggtccg
aaccggatcggccagggcatcgagttcgattactgctgctgccatgcctgcttcgcgctg
catgacgccggctacgaatcgatcatggtcaactgcaacccggaaacggtgtcgaccgac
tatgacaccgcggaccgactctatttcgagccgctgacggccgaagacgtgctcgagatc
atcgacaccgagcgctccaacggcacgctgcgcggcgtgatcgtacagttcggcggccag
acgccgctgaagctggcgcgcgcccttgaagcggccgacgtgccgatcctcggcacctcc
ccggacgcgatcgacctcgccgaggatcgcgatcgcttcaagcgcatcctcgacaagctg
cggctgaagcagccgaagaacggcatcgcctactcggtcgaacaggctcgcctggtcgcg
gccgaactcggcctgccgctggtagtgcgtccgtcttacgtgctcggcggccgcgccatg
cagatcatccgcgaggacaatcagctcagcgactatctgctcggcaccctgcccgagctg
gtgccgggcgacgtcaaggcacgctatccgaacgacaagaccgggcagatcaacaccgtg
ctcggcactaacccactgctgttcgaccgctatctgtcggacgcaacggaagtcgacgtg
gactgcctgtcggacggcaaagacaccttcatcgtcggcatcatggagcacatcgaagag
gccggcattcactccggcgactccgcctgctcgctgccgccgcactcgctcagcgccgaa
accatcgccgagctggaacgccagacccgtgagctggcgctgggcctcgacgtcgtcggc
ctgatgaatgtgcagtacgccatcaaggacggcgagatctacgtgctggaggtcaatccg
cgcgcatcccgtaccgtgccgttcgtcgccaaggtgatcggcatgccggtcgccaagctc
gcggcgcgaatcatggccggcgagaagatcgccgacctcggcctgaagaagcgcacgctt
gaccatgtcggcgtcaaggaatcggtgttcccgttcgcgcgcttcccaggtgtcgacacc
gtgctcggcccggagatgcgctcgaccggcgaagtgatggggctcgatcgttcattcgag
gttgccttcgccaagagccagctcggcgggggcacccgcgtgccgcgcaagggcaccgtc
ttcgtgtcggtccgcgaaagcgacaaggcgcggatcctcgacgccgtgaagctgctgcac
tcggtcggcttcagggtgatcgccacctccgggacccagcgctatctggcggatcacggc
gtgccggcggagaagatcaacaaggtgctggaaggccgtccgcacatcgtcgacgccatc
atgaacggcgaagtgcaactggtgttcaacaccaccgaggggccgcaggcgctggccgac
agccggtcgctgcggcgcgctgccctcttgcataaagttccctattacaccactctttcg
ggcgcggtggccgccgcaaagggcatccgggcctatttggatggggaccttgaggtccgg
accctgcagagctacttttccgaaagctga
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