Rhodopseudomonas sp. P1: LRC39_24510
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Entry
LRC39_24510 CDS
T11217
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhoe Rhodopseudomonas sp. P1
Pathway
rhoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRC39_24510 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoe03019
]
LRC39_24510 (recQ)
03400 DNA repair and recombination proteins [BR:
rhoe03400
]
LRC39_24510 (recQ)
Enzymes [BR:
rhoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRC39_24510 (recQ)
Messenger RNA biogenesis [BR:
rhoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LRC39_24510 (recQ)
DNA repair and recombination proteins [BR:
rhoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LRC39_24510 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
XAT73374
LinkDB
All DBs
Position
5307891..5309741
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AA seq
616 aa
AA seq
DB search
MIAPVSRQTDDDLDARALSVLNHVFGLPSFRGQQEAIVRHVADGGDALVLMPTGGGKSLC
YQLPALLRDGCGVVVSPLIALMRDQVAGLLESGVRAAALNSTLSYDEANAIEQQLLKGEL
DLLYVAPERLLTPRCLALLAKAKLSLFAIDEAHCVSQWGHDFRPEYVGLSAIAEKFPNVP
RIALTATADALTRREIAERLALTDAPCFVSSFDRPNIRYTIVDKQNAPAQLKAFIDDRHR
GHSGVVYCLSRAKVEDIAETLSKSGLTALPYHAGLPPEVRARNQDRFLNEDGIVIVATIA
FGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSDAWMAYGLSDIVQQRRMIDES
SGSDAFKRVSMGKLDALVGLCESTGCRRTRLLGYFGETSPHPHCGNCDNCLTPPKVIDGT
VAAQKLLSCAYRTGQRFGAQHLIDVLLGRLTERVSQFGHDKLSVFGIGGEFGEKQWRAVI
RQLVSLGHLTPDSEAFGALKLTETSRAVLKGESEVALREQTGRPPRSKSRRGDLVGGAQR
ETSGDPELFAALKAWRSEVASARGVPAYVVLHDATIDGLAAAKPRTLDEMRGIPGIGDKK
LEHYGAALLAVIGEHR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctccggtttcgcgtcagaccgacgacgacctcgacgcccgggcgctgtcggtt
ctcaaccacgtgttcgggctgccgtcgttccgtggccagcaggaagcgatcgtgcggcat
gtcgccgatggtggcgatgcgctggtgttgatgccgaccggcggcggcaagtcgctgtgc
tatcagttgccggcgctgctgcgcgacggctgcggcgtggtggtgtcgccgctgatcgcg
ctgatgcgcgaccaagtggctgggctgctggaaagcggcgtacgtgcggccgcgctgaat
tcgacgctgtcctacgacgaggccaacgcgatcgagcagcaactcctcaagggcgaactc
gatctgctgtatgtcgcgcccgagcgattgctgacaccgcgctgtctggcgctgctggct
aaagccaagctgtcgctgtttgcgatcgacgaggcgcattgcgtgtcgcaatggggccac
gacttccgtcccgaatatgtcggcctctcggccatcgccgagaagtttccgaacgtgccg
cggatcgcgctcaccgcgaccgccgacgcgctgacccggcgcgagatcgccgagcgactg
gcgctgacggatgcgccctgcttcgtgtcgagcttcgaccggccgaacattcgctacacc
atcgtcgacaagcagaacgcaccagcccaactcaaagcctttatcgacgaccgccaccgc
ggccattccggcgtggtgtattgcctgtcgcgcgccaaggtcgaggacatcgccgagacg
ctgagcaaatccggcctcaccgcgctgccgtatcacgccggcctgccgccggaggtgcgc
gcgcgcaatcaggatcgcttcctcaatgaggacggcatcgtgatcgtggccacgatcgcg
ttcggcatggggatcgacaaaccggacgtgcggttcgtcgcgcatctcgatctgccgaag
agcatcgaggcctattaccaggagaccggacgcgccggccgcgacggcaagccgtccgac
gcctggatggcctatggcctgtccgacatcgtccagcagcgccggatgatcgacgagagc
agcggctcggacgccttcaagcgggtgtcgatgggcaagctcgatgcgctggtcggtttg
tgcgaatccaccggctgccggcgcacgcggctgctcggctatttcggcgagacctcgccg
cacccgcactgcggcaattgcgacaactgcctgacccctccgaaggtgatcgacggcaca
gtggcggcgcagaagctgctgtcctgcgcctatcgcaccgggcagcggttcggcgcccaa
cacctgatcgacgtgctgctcggccggctgaccgagcgcgtttcgcagttcggccacgac
aaactgtcggtgttcggcatcggcggcgagtttggcgagaaacaatggcgcgcggtgata
cggcaactggtgtcgctcgggcatctgacgccggacagcgaggcgttcggcgcgctgaag
ctgaccgagacctcgcgtgcggtgctgaagggtgagtccgaggtggcgctgcgcgagcag
accggccgcccgccgcggtcgaaatcgcgccgcggcgatctggtcggcggcgcccagcgc
gagaccagcggcgatccggagctgtttgctgcgctgaaggcgtggcggtctgaagtggcc
agcgctcgcggcgtgccggcctatgtggtgctgcacgatgccacgatcgatgggctggcc
gcggcaaaaccgcgaacgctggacgagatgcgtggcattccgggcattggcgacaagaag
ctcgagcattacggcgccgcactgctggcggtgatcggcgaacaccgttag
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