Rhodoferax sp. WC2427: AB3G31_02885
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Entry
AB3G31_02885 CDS
T10716
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB3G31_02885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rhof02022
]
AB3G31_02885
02035 Bacterial motility proteins [BR:
rhof02035
]
AB3G31_02885
Two-component system [BR:
rhof02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
AB3G31_02885
Bacterial motility proteins [BR:
rhof02035
]
Pilus system
Twitching motility proteins
AB3G31_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_lid_14
HTH_8
AAA_5
HTH_30
AAA_16
AAA
HTH_23
MSL2_3
AAA_3
AAA_2
HTH_28
VpsR
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XDC21196
LinkDB
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Position
complement(605527..606912)
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AA seq
461 aa
AA seq
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MLYELTLLREGYRIDTAADLQEARALLERKRFDVVITDMRLPDGLGLALLHGLKAQQRPE
RVIVMTAYGSAENAVEALKAGAFDYLTKPVDLKQFRAVVASAIQDTSQSARAATTNEKAS
LRLSGGQGALQKLVGSSEAMQGVKQRIVKVARSMAPVLVRGESGTGKELVAQALHANSHR
AAGPLVAVNCSAIPENLLEAEFFGAKKGSYTGALQDRQGYFQAARDGTLFLDEIGDLPLA
MQSKLLRAIQERSVRPLGSTQEDAVDVRIVSATHKDLAADVKAGRFRQDLYYRLNVIEIA
VPPLRERRGDLPALCEALLARIALESGMPVPLLSPELLAQLASHPLSGNVRELENLLHRA
VAMGDGDALHVDFNADFDATEPTPLAQSSLLAAAAPCAEIPSDLQAFLDQQEREILVKVL
LDTGFNRTATAQRLGLSLRQIRYRIERLNIATPQDNEPQDL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacgagctgaccttgctgcgcgagggctaccgcatcgacaccgccgccgacctg
caggaagcccgcgcactgctggagcgcaagcggtttgacgtggtgatcaccgacatgcgc
ctgcccgacggcctgggcctggccctgctgcatggcctgaaagcccagcagcggccagag
cgcgtcatcgtcatgaccgcctatggctcggccgagaacgcggtcgaggcgctgaaggcc
ggggccttcgactacctgaccaagccggtggatttgaaacaattccgtgccgtggtggcc
tcggccatccaggacaccagccagtccgcacgcgccgcaactactaacgaaaaagcctcc
ttgcgcttatctggtgggcagggagcgctacaaaaattggtaggaagctcggaggccatg
caaggcgtcaagcagcgcatcgtgaaagtggcgcgcagcatggcaccggtgctggtgcgc
ggcgaatcgggcaccggcaaggaattggtggcccaggccctgcacgccaacagccaccgc
gccgccgggccgctggtggcggtgaactgcagcgccatccccgagaacctgctggaggcg
gagttctttggggccaagaagggctcgtacaccggcgcactgcaagaccggcagggctac
ttccaggcggcccgcgacggcacgctgtttctggacgagattggcgacctgccgctggcc
atgcagtccaagctgctgcgcgccatccaggagcgcagtgtgcgcccgctgggctccacc
caggaggacgcggtggacgtgcgcatcgtcagcgccacccacaaggacctggccgccgat
gtgaaggccggccgcttccggcaagacctgtactaccggctgaatgtgattgaaatcgcc
gtgcccccgctgcgtgagcgccggggcgatctgcccgcgctgtgcgaggcactgctggcc
cgcatcgccctggagtccggcatgccggtgccgctgctgtcacccgaactgctggcgcaa
ctggccagccatccgctgagcggcaatgtgcgcgagctggaaaacctgctgcaccgcgcc
gtggccatgggtgacggcgatgccttacacgtcgatttcaatgccgactttgatgccacc
gagcccacaccgctggcgcagagcagcctgctggcggctgccgcgccctgcgccgagatc
cccagcgacctgcaggcctttctggaccagcaggagcgcgagattctggtcaaggtgctg
ctggacaccggcttcaaccgcaccgccacggcccaacgcctgggcctgagcctgcgccag
atccgctaccgcattgagcgcctgaacatcgccaccccgcaagacaatgaaccccaagac
ctctga
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