Rhodoferax sp. WC2427: AB3G31_04975
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Entry
AB3G31_04975 CDS
T10716
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof03420
Nucleotide excision repair
rhof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB3G31_04975
03430 Mismatch repair
AB3G31_04975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhof03400
]
AB3G31_04975
Enzymes [BR:
rhof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3G31_04975
DNA repair and recombination proteins [BR:
rhof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3G31_04975
MMR (mismatch excision repair)
Other MMR factors
AB3G31_04975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
HTH_7
Motif
Other DBs
NCBI-ProteinID:
XDC19974
LinkDB
All DBs
Position
1026077..1028461
Genome browser
AA seq
794 aa
AA seq
DB search
MFSVNTNLPAQDAPLLHNLNPEQLAAVTLPTGHALILAGAGSGKTRVLTTRIAWLLQTGR
VTPGGILAVTFTNKAAKEMVLRLGTMLPINVRGMWIGTFHGLCNRLLRAHYKLANLPQSF
QILDTQDQLSAIKRLCKQFNIDDQQYPAKQTQWFIGNCKEEGLRPDAVESHDPQTRKKIE
IYALYEEQCQREGVVDFGELMLRSYELLRDQDAIREHYQRRFRHILIDEFQDTNKLQYAW
IKMLSGHGPKDLANGTSMPGGSVLAVGDDDQSIYAFRGARVGNMADFVREFGVTQQIKLE
QNYRSFSNILDSANQLISHNSNRLGKDLRTTQGPGEPVRVVENPRDLDEAQWIVDEVKQL
VRDGMPRQEIAVLYRSNAQSRVIETALFNAAIPYRVFGGLRFFERAEIKHALAYLRLLEN
ANDDTSFLRVVNFPPRGIGARSLEILQDAARSNGCSLHDAVSIVPGKAGANFGAFVAKLD
VLREQTEGLSLREIIDLVLDHSGLLAHFKADREGEDRVENLEELVNAAESFVSQQGFGRD
AVALPLDELSQSPASQGLDPNAPAAEGFIDQDSGETLSPLAAFLTHAALEAGDNQAKAGQ
DAVQLMTVHSAKGLEFDAVFVGGMEEGLFPHENSLSDRQGLEEERRLMYVAITRARQRLY
LSFSQSRLLHGQTRYNPRSRFFDELPEGALKWITSKPSGYGFAPKSGASHAYGYSAGGTF
NKENAPFASPPVPPQKATPSHGLRVGMQVFHTKFGEGKVNLLEGSGDDARAQINFPRHGV
KWLALSVAKLTPVP
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgttctctgtaaatactaacttgcccgcacaggatgcgccgctcctccacaaccttaac
cctgagcagttggcggctgttaccctgcccaccggccatgcgctgattctggccggggcc
ggttccggcaaaacccgggtgctcaccacccgcatagcctggcttctgcaaaccgggcgc
gtcaccccgggtggcatcctggcggtcacatttaccaacaaggccgccaaggaaatggtg
ctgcgcctgggcactatgctgcccatcaacgtgcgtggcatgtggataggcaccttccac
ggcttgtgcaaccgcctgctgcgcgcgcattacaagctggcgaacctgccgcaaagcttc
cagatcctggacacccaggaccagctcagcgccatcaaacggctatgcaagcaattcaat
atagacgaccaacagtaccctgccaaacaaacccaatggtttattggcaactgcaaagaa
gaaggtctgcgccccgatgcggtggaaagccacgacccgcaaacccgcaagaaaatcgag
atttacgcgctgtacgaagagcagtgccagcgcgagggcgtggtcgattttggcgagctg
atgctgcgcagctacgagctgctgcgcgaccaggatgccatccgcgagcactaccagcgc
cgctttcgccacatcctgatcgacgagttccaggacaccaacaagctgcagtacgcctgg
atcaagatgctgtccggccacggccccaaggatttggccaacggtacgtccatgcccggt
ggcagcgtgctggcggtgggcgacgacgaccagagcatctatgccttccgcggcgcgcgg
gtgggcaacatggccgactttgtgcgcgaattcggcgtcacccagcagatcaagctggag
caaaactaccgcagcttcagcaacatcctggactcggccaaccagctcatcagccacaac
agcaaccgcctgggcaaagacctgcgcaccacccaaggccccggcgagccggtgcgggtg
gtggagaacccgcgcgatctggatgaagcccagtggatcgtcgacgaggtcaagcagctg
gtgcgcgacggcatgccgcgccaggaaatcgctgtgctgtaccgcagcaacgcccaaagc
cgggtgatcgaaaccgcgttgttcaacgccgccattccctaccgtgtgtttggcggcctc
cgcttctttgagcgcgccgaaatcaagcacgcgctggcctatttgcgcctgctggaaaac
gccaacgacgacaccagcttcctgcgcgtggtcaacttcccgccgcgcggcatcggtgcg
cgcagcctggagattctgcaagatgccgcccgcagcaatggctgctcgctgcacgacgcc
gtcagcatcgtgcccggcaaggccggggccaactttggtgccttcgtggccaagctggac
gtgctgcgcgagcagaccgaaggcctgtctttgcgcgaaatcatcgacctggtgctggac
cacagcggcctgctggcccacttcaaggccgaccgcgagggcgaagaccgggtggagaat
ttggaggagttggtcaacgcggccgaaagtttcgtctcccaacagggctttggccgcgat
gccgtggccctgccgttggacgagctcagccagtcccccgccagccagggcctggacccc
aacgccccggccgccgagggcttcatcgaccaggacagcggcgaaaccctgtcgcctctg
gccgccttcctgacccacgctgccctggaggccggcgacaaccaagccaaggccgggcaa
gatgccgtgcagctcatgaccgtgcactccgccaaggggctggaatttgatgctgtcttt
gtaggcggcatggaagaaggcctgttcccgcacgaaaactcgctcagcgaccgccagggc
ctggaggaagagcgccgcctgatgtacgtggccatcacccgcgcccgccagcgcctgtac
ctcagcttctcgcaaagccgcctgctgcatggccagacccgctacaacccgcgcagccgc
ttttttgacgaactgccggaaggcgcgctgaagtggatcacctccaaaccctcggggtat
gggtttgctcctaaatcaggagcttctcacgcttatggatacagcgctggaggcactttt
aataaagaaaatgcgcctttcgccagcccgcctgtgccgccgcaaaaagccacccccagc
cacggcctgcgggtcggcatgcaggtgttccacaccaaattcggcgaaggcaaagtcaac
ctgctggaaggcagcggcgacgatgcccgggcgcaaatcaacttcccacgccatggcgtg
aaatggctggcgctgagcgtggccaagctgacccccgtgccctga
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