Rhodoferax sp. WC2427: AB3G31_05105
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Entry
AB3G31_05105 CDS
T10716
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhof Rhodoferax sp. WC2427
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhof03009
]
AB3G31_05105 (rimO)
Enzymes [BR:
rhof01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AB3G31_05105 (rimO)
Ribosome biogenesis [BR:
rhof03009
]
Prokaryotic type
ribosomal protein modification factors
AB3G31_05105 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
XDC19998
LinkDB
All DBs
Position
1052134..1053525
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AA seq
463 aa
AA seq
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MIEAISPSKIPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVNTCGFID
DAVKESLDTIGEALATNGRVIVTGCLGAKAGDAGGNLVRQMHPSVLAVTGPHATQEVMDA
VHANLPKPHDPFLDLIPNAFGTAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
NIGDVLSDAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELVQTLADI
AEPYGAWVRLHYVYPYPSVDEIIPLMATGRVLPYLDVPLQHSHPDVLKRMKRPASGEKNL
ERIQRWREACPSLVIRSTFIAGFPGETEEEFAHLLDFMREAQIDRAGCFAYSPVDGAAAN
DIPGMLPFELREERRARFMAVAEEVSAAKLLKRVGATMQVLVDSAPGMGKKGGIGRSYAD
APEIDGIVRLLPPEKISKTLKVGEFTKARIVGTQGHDLVALPI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagcaatttccccatccaaaatacccaaagtcgggtttgtcagcctgggctgc
cccaaggccttgacggactccgagctcatcctcacccaactcagcgccgaaggctaccaa
acctccaagacctttgaaggtgccgacctggtgatcgtcaacacctgtggtttcattgac
gatgccgtcaaggaaagcctggacaccattggcgaagccctggccaccaatggccgcgtc
atcgtcactggctgcctgggggccaaggcgggcgatgccggcggcaacctggtgcggcaa
atgcaccccagcgtgctggctgtcaccggcccgcacgccacccaggaggtgatggatgcc
gtccacgccaacctgcccaagccacacgacccgtttttggacctgattcccaacgccttt
ggcaccgcaggcatcaagctcacgccccggcattacgcctatttgaagatcagcgaaggc
tgcaaccaccgctgcaccttttgcatcatcccgtcgatgcgcggcgatctggtgtcgcgc
aatatcggcgacgtgctcagcgatgccaaggccttgtttgaaggtggcgtgaaagagctg
ctggtcatcagccaggacacctcggcttacggcgtggacgtgaagtaccgcaccggcttc
tgggacggcaagccggtcaaaacccgcatgctggaactggtgcaaaccttggccgacatc
gccgagccttatggcgcctgggtgcgcctgcactatgtctacccgtaccccagcgtggac
gagatcattccgctgatggccacgggccgtgtgctgccatacctggacgtgcccttgcag
cacagccaccccgacgtgctcaagcgcatgaagcgcccggccagcggcgagaaaaacctg
gagcgcatccagcgctggcgcgaggcctgcccgtcgctggtaatccgaagcaccttcatc
gccggtttcccgggcgaaaccgaagaagaatttgcgcatctgctggatttcatgcgcgaa
gcccagatcgaccgcgcaggctgctttgcctacagcccggtggatggagcggccgccaac
gacattcccggcatgctgcccttcgagttgcgcgaagaacgccgcgcccgcttcatggcc
gtggccgaagaagtgtctgccgccaagttgctcaagcgcgtgggtgcgaccatgcaggtc
ttggtggattcggcgcccggcatgggtaaaaagggcggcattggccgcagctacgccgac
gcgcccgagatcgacggcatcgtgcgcctgctgcctcccgaaaaaatcagcaagaccttg
aaggtgggggagttcaccaaagcgcgcattgtgggtacccagggccacgatctggtggct
ttgccgatctaa
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