Rhodoferax sp. WC2427: AB3G31_06370
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Entry
AB3G31_06370 CDS
T10716
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof03030
DNA replication
rhof03430
Mismatch repair
rhof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3G31_06370
03430 Mismatch repair
AB3G31_06370
03440 Homologous recombination
AB3G31_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhof03032
]
AB3G31_06370
03400 DNA repair and recombination proteins [BR:
rhof03400
]
AB3G31_06370
Enzymes [BR:
rhof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3G31_06370
DNA replication proteins [BR:
rhof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3G31_06370
DNA repair and recombination proteins [BR:
rhof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3G31_06370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
Cho_C
UvrC_M
GIY-YIG
RNase_H_2
Rv2179c-like
DUF7508
DNA_pol_A_exo1
LEM-3_GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
XDC20242
LinkDB
All DBs
Position
complement(1324987..1326384)
Genome browser
AA seq
465 aa
AA seq
DB search
MTPDFPPLAFVDIETTGGSAGRDRVTEVGIVEVDGPHVRRWSQLIHPGTRIPAFIQQLTG
IDDAMVADQPPFEAVAAEILDRLRGKLFVAHNARFDYGFLRAEFKACGIAWQAPVLCTVQ
LSRRLFPTQARHNLDTLIAVHGLQMPARHRALADADALAQFWQLLLHRFDTATLSAAVNA
LSARPAVPPQLDAEHIDRLPETPGVYVFYDAQRRPLYIGKSKNLRSRVLAHFSAALSKPK
EMRLSQQVADIDWLETEGEVGALLLEAQWVKSKQPSMNVQLRRQRDLHAWQLDDTSALLT
PLVPRLVNGPDIALGVQDNLFGPFRSRREALQLLETLATTQGLCRGVLGLEKLAPGRPCF
AHQIRQCAGACVGTQPLAQHNLALLTALTRHKVQRWPHPGPIGLREGRDLHVLHDWRYLG
TAKSEEEVAELLESGHTAFDFDTYKILSKALAKARAGQIVRLGQR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgatttcccgcccctggcctttgtcgacattgaaaccaccggcggcagcgcc
gggcgcgaccgcgtcaccgaggtcggcatcgtcgaggtggacggcccccacgtgcgccgc
tggagccagctgatccaccccggcacgcgcatcccggccttcatccagcagctcaccggc
atcgacgacgcgatggtggccgaccagccccccttcgaggccgtggccgccgagatcctg
gaccggctgcgcggcaagctgtttgtggcccacaacgcccgcttcgactacggtttttta
cgggccgagttcaaggcctgcggcatcgcctggcaggcccccgtgctgtgcaccgtgcag
ctatcgcgccgcctgttccccacccaggcgcggcacaacctcgacaccctgatcgccgtg
cacggcctgcagatgcccgcgcgccaccgcgccctggccgatgccgacgcgctggcccag
ttctggcagttgctgctccaccggttcgataccgccacgctcagcgcggcggtcaatgcc
ctttcggcccgccctgccgtgccgccgcagctggatgccgagcacatcgaccgcctgccc
gaaacccccggcgtgtacgtgttttacgacgcccagcgccgcccgctgtacatcggcaaa
agcaaaaacctgcgcagccgcgtgctggcccacttcagcgcggcactcagcaaacccaag
gaaatgcgcctgagccagcaggtggccgacatcgactggctggaaaccgagggcgaagtc
ggcgcgctgctgctcgaagcccagtgggtcaaaagcaagcaacccagcatgaacgtgcaa
ctgcgccgccagcgcgacctgcacgcctggcagctggacgacaccagcgcactgctgacc
ccgctggtgccgcgcctggtcaacggccccgacatcgccctgggcgtgcaagacaattta
ttcggccccttccgctcgcgccgcgaagccctgcagctgctggaaaccctggccaccacc
cagggcctgtgccgtggcgtgctgggcctggaaaagctcgcgcccggccgcccctgcttc
gcccaccagatccgccagtgcgccggggcctgcgtgggcacccagcccctggcccagcac
aacctggccctgctcaccgccctgacccgccacaaggtgcagcgctggccgcaccccggc
cccattggcctgcgcgaaggccgcgacctgcacgtgctgcacgactggcgctatctgggc
accgccaaaagcgaggaagaagtggccgagctgctggagtccggccacaccgcgttcgac
ttcgatacctacaagattctgagcaaggccctggccaaggcgcgggccgggcagatcgtg
cggctggggcaacgctga
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