Rhodoferax sp. WC2427: AB3G31_09960
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Entry
AB3G31_09960 CDS
T10716
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhof Rhodoferax sp. WC2427
Brite
Enzymes [BR:
rhof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3G31_09960
DNA repair and recombination proteins [BR:
rhof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AB3G31_09960
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDC20926
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Position
2096009..2098543
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AA seq
844 aa
AA seq
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MSNAFDPLWFAPGTGLLAQIQQAMAQRQAHPARTVVLLPYAQLMPLAQRFWAQARPDGFA
PRFESTLNWSHGLGGTAQGPHDLRFDTAMDMLQAPDLLERAGLGAQREALSARLVEAAQQ
LAPLVAAVPPPQRAEWAVQAREAVGLGMEAPVLALECVVARIALEWAAASSYATDVLWND
SVPAALECIVVLDGFQTDPLVHALCAAWGDKVTRLVCPTPPPPPMPALHPASDSEDEAQR
AAACVLRHIEAGRTPVALVATDRLLTRRIRAMLAAQQVRIRDETGWKLSTTRAAAQLVVT
LRAARWDASSDAVLDWLKNAPAFRPRTVQSLEKALRKASVQSWSAWSPEATPKQPAVSDA
VRLANSLRASLQAARPLAAWLAAVRGLLQASGQWAALEADAAGAKLLSALRLTEGAEAEF
ADLPQAARRLRLAEFSTWVGDALEAASFVPDHPQDEQVVVLPLSQLLARPFAALVLPGCD
EVRLAASPEPPGAWTAAQREALGLPSRAVLEAAARAAWANALQTPCTDVLWRQSDASGET
LLASPLVQALQVAGKVPDAADPRIPRSLTPLPSERPLPVGAALPVARLSASAYEDLRRCP
YRFFGLRQLGLQESQELTGEVDKRDFGTWLHAVLRHFHEALKVAPTPIPSARVAMMNVAA
EQITQDMHLEPGEFLPFASAWPRVRDGYLAWLAPHEAAGGQFEQAESALELPLGTITLVG
TIDRVDQVHADGHTTALVIDYKTENAQATGKRIQQPLEDTQLAFYAALLPHDTLRAAYLN
VGEKDGSQLFEQAEVVEARDALVHGILDDMQRIAAGATLAALGEGAACTFCAARGLCRKD
WWTA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgctttcgaccccctctggtttgcccctggcaccggcctgttggcccagata
cagcaggccatggcgcagcgccaggcccatcccgcgcgcaccgtggttctgctgccctac
gcgcagctgatgccgctggcccagcggttttgggcgcaggcccggcccgatggctttgct
ccgcgtttcgagtccacgttgaactggtcgcacggcctgggcggcacggcccaggggccg
cacgatctgcgctttgataccgccatggacatgctgcaggcccccgacctgctggagcgt
gccgggctgggcgcgcagcgcgaggccttgtcggcacgtctggtcgaggccgcccagcag
ctggccccgctggtggccgccgtgccgccgccgcagcgcgccgagtgggccgtccaggcc
cgcgaggcggtgggcctgggcatggaagccccggtgctggcgctggaatgcgtggtggcc
cgcatcgcgctggaatgggccgccgcctccagctacgccaccgacgtgctgtggaacgac
agcgtgcccgcggcgctggagtgcatcgtcgtgctcgatggttttcagaccgatccgctg
gtccacgccctgtgcgccgcctggggtgacaaggtcacgcgcctggtgtgccccacgccg
ccgccgccacccatgcccgcgttgcacccggccagcgattccgaagacgaggcccagcgc
gctgcggcctgcgtgctgcgccacatcgaggccgggcgcacgccggtcgccctggtggcc
accgaccgcctgctgacccggcgcatccgcgccatgctggccgcgcagcaggtgcgcatc
cgcgacgagaccggctggaagctgtccaccacgcgggctgccgcgcaactggtggtcaca
ctgcgggcggcccgctgggacgccagcagcgacgcggtgctggactggctgaagaacgcc
cccgcgttccgcccccgcaccgtgcagtcgctggagaaggcgctgcgcaaggcgtcggtg
caaagctggtctgcctggagtcccgaggccacgccgaaacaacccgccgtctccgatgcc
gtgcgcctggccaacagcctgcgcgccagcctgcaagccgcccgtccgctggccgcctgg
ctggccgccgtgcgtggcttgttgcaggccagcggacagtgggctgcgctggaggccgat
gccgccggggccaagctgctctcggccctgcgcctgaccgagggggcagaggccgaattt
gccgacttgccccaggccgcccgccgcctgcgcctggccgaattcagcacctgggtgggc
gatgcgctggaggccgccagttttgtgcccgaccacccgcaggacgagcaagtggtggtg
ctgcccctgagccagctgctggcccgcccgtttgccgccctggtgctgcccggctgcgac
gaggtgcgcctggccgcctcgcccgagccgcccggggcctggaccgccgcgcagcgcgaa
gccctgggcctgccgtcccgcgccgtgctggaagccgccgcccgcgccgcctgggccaac
gccctgcaaacgccgtgcaccgacgtgctgtggcggcaaagcgatgcctcgggcgaaacc
ctgctggccagcccgctggtgcaggcgctgcaggtggcgggcaaagtcccggatgccgcc
gacccgcgcatcccccgcagcctgacaccgctgcccagcgaacggcccttgcccgtgggt
gccgcgctgcccgtcgcccgcctgtcggccagcgcctacgaggatttgcgccgctgcccg
taccgttttttcggcctgcgccaactgggcctgcaggagtcgcaagagctcaccggcgag
gtggacaagcgcgacttcggtacctggctgcatgccgttctcaggcattttcatgaggca
ttaaaagtggctcccacgcccattccatcagcacgggtagctatgatgaatgtagcggcc
gagcagatcacgcaagacatgcacctggagccgggcgagttcctgccctttgcctcggcc
tggccccgggtgcgcgacggctacctggcctggctggccccgcacgaagccgcgggcggc
cagttcgagcaggccgaaagcgcgctcgaactcccgctgggcaccatcacgctggtcggc
accatcgaccgggtcgaccaggtgcacgccgacggccacaccaccgcgctggtcatcgac
tacaagaccgaaaacgcccaggccaccggcaaacgcatccagcagccgctggaagacacc
cagctggccttctacgccgcgctgctgccgcatgacaccttgcgcgccgcctacctcaat
gtgggcgaaaaagacggcagccagctgttcgagcaggccgaggtggtcgaggcccgcgac
gcattggtccacggcatcctcgacgacatgcagcgcattgccgctggcgccaccctcgcg
gcgctgggcgagggcgcggcctgtactttttgtgccgcgagaggcctgtgccgcaaggac
tggtggacggcgtaa
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