Rhodoferax sp. WC2427: AB3G31_09980
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Entry
AB3G31_09980 CDS
T10716
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rhof Rhodoferax sp. WC2427
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhof03400
]
AB3G31_09980
Enzymes [BR:
rhof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3G31_09980
DNA repair and recombination proteins [BR:
rhof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AB3G31_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
XDC20930
LinkDB
All DBs
Position
2101576..2104881
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AA seq
1101 aa
AA seq
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MTLAAYEHNGHPVERAAFYAIACDPRRSIAVEACAGAGKTWMLVSRILRALLEGSLAKDG
HGTAAHEILAITFTKKAAGEMRQRLNEWLVEFAQATPEKLAEELLARGVPPAQIALQAPA
LKNLYPQLLASARPVQIRTFHSWFAALLRTAPLAVLQDLGLPAHYSLLEDDVEAVTAVWP
RFYATVVDSPGARADFEALVAVQGRFQAHKALTAALNKRVEFVLADAQGVVDASVPPFDV
QFPAFTGLAAPEDLLWAQRPLLQEAAGHLGRASAVTFSAAGSALEQALTAQDADAVLAAL
LTQKGTARKFGEKIVGIATVRAAQDLVLQVAQAQLQHAAWAHQQRMARLTRVLIAELAAL
KYERGWVDMNDVERAASVMLSDPVLSGWVQERLDAKVKHLLIDEFQDTSPLQWQALHAWL
SGYAGASGAPSVFIVGDPKQSIYRFRRAEPQVFRAAQAFVVDGLGGDLLSCDHTRRNAPP
VMAAVNAVMSAAQAAGAYDGFREHTTESTALGALRYLPAIPRDANASAIQAAQDGWRDSL
GTPREEPEDTLRTLECRQAAQWLAGQLADGLAPKDVMVLSRRRERLGHMRDALRALHIPT
QQPEKADLADAPEVQDIAALLDALVSTHHDLSLAQALKSPLFGVADADLVHLAQLQRAAR
ATVPELAPSPLRGEGGGEGVSPVAHDSSWWSLLHNSELLTPTLSALAPVLVQWKQWLDAL
PPHDALDAIYAHGDVLARFAAAAPAALRTSVLANLRAVLGTALQLNEGRFATPYALVRAL
KAGGVKAPVTSAPDAVRLLTVHGAKGLEAALVLLLDTDSPPGKAETMGVLVDWPGEAEYP
VRLVFLASESNPPACVVDVLAIEQAARQREELNGLYVAMTRARSQLVLSSVVPHKAVDGS
WWQRLQPLGERIGALAAADPLQAAAADADFTLLVVPDIGLQVAPKRPEVNAAESLESRVG
QAMHRLLEWGVTDPARQQAVAREFSLDAAQSQKAATMAAAIRAGEGAWAWDAEVVDWAGN
EVALNYQGQTLRLDRLVRRKDTGAWWVLDHKSKAQPQRDAGLVQQLETYRAALRVLYPGA
AVEAAFLTAGGGLVVVETASI
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcgccgcctacgaacacaacggccacccggtcgagcgcgccgccttctacgcc
atcgcctgcgacccccggcgcagcatcgcggtcgaggcctgcgcgggcgcgggcaaaacc
tggatgctggtgtcgcgtatcctgcgggcgctgctggagggcagtctggccaaggatggc
catggcaccgccgcccacgagatcctggccatcaccttcaccaaaaaagccgccggtgaa
atgcgccagcgcctcaacgaatggctggtcgagttcgcccaggcaacacccgagaagctt
gccgaggaactcctggcccgcggcgtgccgcccgcgcagatcgccctgcaggccccggcc
ctgaaaaacctttacccccagctgctggccagtgcccgcccggtgcagatccgcaccttc
catagctggtttgccgccctgttgcgcactgcgccgctggccgttttgcaggacctgggc
ctgcccgcccactacagcctgctggaagacgacgtggaggccgtcaccgccgtgtggccg
cgcttttacgccaccgtggtcgacagccccggcgcccgcgccgactttgaagccctggtg
gccgtgcagggccgcttccaggcacacaaagcgttgaccgccgcgttgaacaagcgggtc
gagtttgtgctggccgacgcgcagggcgtggtggatgcgtcggtgccgccgttcgacgtg
cagtttcccgccttcaccgggctggccgcacccgaggatttgctctgggcccagcgcccg
ttgctgcaagaggccgctggccacctgggccgggcgagcgccgtgaccttctccgccgca
ggcagcgcgctggagcaggcgctaacggcccaggatgcagatgcggtgctggccgccttg
ctcacccaaaaaggcacggcccgcaagtttggcgaaaagattgtcggcatcgccaccgtg
cgcgccgcgcaagacctggtgctgcaggtggcccaggcccaattgcagcacgccgcctgg
gcgcaccagcagcgcatggcgcgcctcacccgcgtgctgatcgccgagctggccgccctg
aaatacgagcgcggctgggtcgatatgaacgacgtggaacgcgccgcgtccgtcatgctg
tctgaccccgtgctcagcggctgggtgcaggagcggctggatgccaaggtcaagcacctg
ctgatcgacgaattccaggacaccagcccgctgcagtggcaggccctgcacgcctggctc
agcggctatgccggtgcatccggcgcgcccagcgtcttcatcgtgggcgaccccaagcaa
agcatctaccgcttccgccgcgccgagccgcaggtgttccgcgccgcccaggcctttgtg
gtggacgggctgggcggcgacctgctcagctgcgaccacacccgccgcaacgcccccccg
gtaatggccgccgtcaacgccgtcatgtcggccgcgcaggctgccggtgcctacgacggt
ttccgcgagcacaccaccgaatccaccgccctgggggccttgcgctacctgcccgccatt
ccccgcgatgccaatgcctccgccatccaggccgcacaggatggctggcgcgacagcctg
ggcacgccccgcgaagagcccgaagacaccttgcgcaccctggaatgccgccaggccgcc
cagtggctggccgggcaactggccgacggcttggcacccaaggacgtgatggtgctgtcg
cgccgccgcgagcgcctgggccacatgcgcgatgccctgcgcgccctgcacatccccacc
cagcagcccgaaaaagccgacctggccgacgcgcccgaggtgcaagacatcgcagccctg
ctggacgcgctggtgtccacccaccacgacctgtcgctggcgcaggcgctgaaatctccg
ctgtttggcgtggccgacgcggacctggtgcacctggcccagctgcagcgcgccgcccgc
gccactgtccctgaattagctccctcgcccctccggggagagggcgggggtgagggggtt
tccccggttgcccatgacagcagctggtggagcctgctacacaattcagagctgcttacg
cccacgctatcagcgctggccccggttttggtgcaatggaaacagtggctggacgcattg
cccccgcacgacgcgctggacgccatctacgcccacggcgacgtgctggcccgcttcgcc
gccgccgcgcccgccgccttgcgcacgtccgtgctggccaatctgcgtgccgtgctgggc
acggccctgcagctcaacgaaggccgtttcgccaccccctacgccctggtgcgcgccctc
aaggccggtggtgtcaaagccccggtcaccagcgcccccgatgccgtgcgcctgctcacc
gtgcacggtgccaagggcctggaggctgcgctggtgctgctgctcgacaccgactccccg
cccggcaaggccgaaaccatgggcgtgctggtggactggccgggcgaggccgagtacccc
gtgcgcctggtctttttggccagtgaatcgaatccgcccgcctgcgtggtcgacgtgctg
gccatcgagcaggccgcccgccagcgcgaagaactcaacggcctgtacgtcgccatgacc
cgcgcccgcagccagctggtgctgtcgtccgtggtgccgcacaaggcggtggatggctcg
tggtggcagcgcttgcagcccctgggtgaaaggatcggagcgctggccgccgccgaccca
ctgcaggccgccgcagccgatgccgatttcaccctgctggtggtgcccgatattggcctg
caggtcgcaccaaagcggcccgaagtgaacgccgccgagtcgctggagtcccgcgtgggc
caggccatgcaccggctgctggagtggggcgtgaccgaccccgcccggcagcaggccgtg
gcccgcgagttcagcctggacgccgcgcagtcgcaaaaagccgccaccatggccgccgcc
atccgtgcgggcgaaggggcttgggcctgggatgcggaggtggtggattgggcgggcaac
gaggtggccctgaactaccagggccagactttgcggctagaccgcctggtacgccgcaag
gacacgggtgcctggtgggtgctggaccacaaatccaaagcccagccgcagcgggatgcg
gggttggtgcagcagttggagacttaccgggcggcgttgcgggtgttgtatccgggggcg
gcggtggaggcggcgtttttgacggcgggcggagggctggtggtggttgaaacggcatca
atttga
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