Rhodoferax sp. WC2427: AB3G31_11565
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Entry
AB3G31_11565 CDS
T10716
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhof Rhodoferax sp. WC2427
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhof03016
]
AB3G31_11565 (truB)
Enzymes [BR:
rhof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB3G31_11565 (truB)
Transfer RNA biogenesis [BR:
rhof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB3G31_11565 (truB)
Prokaryotic type
AB3G31_11565 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XDC17013
LinkDB
All DBs
Position
2452857..2453831
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AA seq
324 aa
AA seq
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MTATPRVRVARRPVHGVLLLDKPLGLSSNDALQKVKWLLRGEKAGHTGTLDPLATGVLPL
CFGAATKFSQLHLDADKTYLATARLGVKTSTGDAEGDVIETRAVAVTQAQIDAVVPRFTG
PIRQVPPMYSALKRDGKPLYEYARAGIEVERPARDVEIFELKVALVPAESAQAAIEIVAK
CSKGTYIRTLGEDIGEALGCGAHLTALRRIATGDFVIGQCVTLAALEAMTEDERLACLLP
VDALLAQHRRVTLDAQNAGRFLSGVRRRGDWPDDDRVAVYGDTPPTLLGVAQIKGGELIP
GRLLSPLDIGQILAQAQKAESPSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacgccacgtgtacgggttgccaggcgccccgtgcacggggtgctgttgctg
gacaagcctttgggcctgtcgagcaacgacgcgctgcaaaaagtcaaatggctgctgcgc
ggtgagaaggccggccacaccggcacgctggacccactggccactggcgtgttgccgctg
tgttttggggccgccaccaagttcagccagctgcacctggatgccgacaaaacctacctg
gctacggcccggttgggcgtgaagaccagtaccggcgatgccgagggcgatgtgatcgag
acccgtgcggtggcggtgacgcaggcgcagatcgatgcggtcgtgccgcgttttaccggg
cccatccggcaggtgccgccgatgtacagcgccttgaagcgcgacggcaagcccttgtat
gaatatgcgcgggcaggaatcgaggttgagcggccagcgcgggacgtcgagatatttgag
ctaaaagtggctttagtgcccgcggaatcggcgcaagcagctattgaaatagtagcaaag
tgctcgaagggtacctacatccgcactttgggtgaggacattggcgaggccctcggatgc
ggtgcgcacttgacggccttgcgccgcattgccaccggcgattttgtgattggccagtgt
gtgacgctggctgcattggaagccatgaccgaagacgagcggctggcgtgtttgctgccg
gtggatgcgctgctggcgcagcaccgccgtgtcacgctggatgcacagaatgcagggcgg
ttcctcagtggcgtgcgccgccggggtgactggcccgacgatgaccgcgtggcggtctac
ggagatacacctccgaccttgctgggtgttgcccagatcaagggcggtgaattgatacca
gggcgactgctaagcccgctggatattggtcagattttggcccaggcgcaaaaagcagag
agccccagcctttag
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