Rhodoferax sp. WC2427: AB3G31_11760
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Entry
AB3G31_11760 CDS
T10716
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof03018
RNA degradation
Brite
Enzymes [BR:
rhof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB3G31_11760
Messenger RNA biogenesis [BR:
rhof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3G31_11760
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDC17052
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Position
2504186..2506042
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AA seq
618 aa
AA seq
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MNFEELNLAPAILKAVQEQGYTEPTPIQAQAIPVVLAGHDLLGGAQTGTGKTAAFTLPLL
QRLTESAAATNKFGGKGIRALVLTPTRELAAQVEESVQTYGKYLELSSTVIFGGVGMNPQ
ITKVKKGVDILVATPGRLLDLMQQGVLDLGQVQILVLDEADRMLDMGFIHDVKKVLAAVP
KDKQSLLFSATFSDEIRDLAATLLKNPQSVQVTPRNTTVQRITQVIHPVGRGKKKALLAH
IIQEHNWSQVLVFTRTKFGANNVAEFLTKNGIESMALHGNKSQSARTQALQGFKSGDIRA
LVATDIAARGIDIDDLPHVVNYEIPNVCEDYVHRIGRTGRAGAEGAAVNLVCLDEEGFMQ
DIERFTKQEIAVQVIEGFMPEPNERAEPIAMGRQTIWGGAGKPPSRDVMQAAAKAARTEM
LQRVRDSKGANGGDGAGRGGNGGPRSNAPRSGPRPPQGDGMAPRPQGARPPQGGRGGRPA
GPGGARTGGGGYGGGNGGGSGGYGGGNSYGGGGNGNGGGYGGGAQPDHTRSASMGGQGPA
PRPAQGGQPDPMRTSVDSMLDRGRRGGFGGGNRNGGGGGGGYGGGNGGGNGGGGFGGGRS
GGGGGSRGPGGPRGSFGR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaagaactgaatctggccccggccattctgaaggccgtgcaagagcaaggc
tataccgagcctacccccatccaggcacaagccattccggtcgtgctggccgggcatgat
ctgctcggcggtgcgcaaaccggcaccggcaaaacggcagcgttcaccctgcccctgctg
cagcgcctgaccgagagcgctgcggcaaccaacaaatttggtggcaagggcatccgtgcc
ctggtgctcacccccacccgcgaactcgccgcccaggtggaagagtcggtgcaaacctac
ggcaaatacctggagttgagctccaccgtgatctttggcggcgtgggcatgaacccgcaa
atcaccaaggtcaaaaagggtgtggacattttggtggcgaccccgggccgcctgctggac
ttgatgcaacaaggcgtgctggacctgggccaggtgcagatcctggtgctggacgaagcc
gaccgcatgctcgacatgggcttcatccatgacgtgaaaaaagtgctggccgcagtgccc
aaagacaagcaaagcctgctgttctcggccactttcagcgatgaaatccgggacctggcc
gctacgctgctgaagaacccgcaaagcgtgcaggtcacgccgcgcaacaccaccgtgcag
cgcatcacccaggtgatccacccggtgggccgcggcaagaaaaaggccttgctggcccac
atcatccaggaacacaactggagccaggtgctggtgttcacccgtaccaaattcggtgcc
aacaacgtggccgaattcctgaccaagaacggcatcgaatcgatggccctgcacggcaac
aagagccagtcggcccgcacccaggccctgcaaggcttcaagagcggcgacatccgcgcc
ctggtggccaccgacatcgctgcccgcggtatcgacatcgacgacctgccacacgtggtc
aactacgaaatcccgaacgtctgcgaagactatgtgcaccgcattggccgtaccggtcgc
gccggtgccgaaggcgctgccgtcaatctggtgtgcctggacgaagaaggcttcatgcag
gacatcgaacgcttcaccaagcaggaaattgcggtgcaagtgatcgaaggcttcatgccc
gaacccaatgagcgcgccgaacccatcgccatgggtcgccagacgatctggggcggtgct
ggcaagccacccagccgcgatgtgatgcaggcggctgccaaagccgcccgcaccgaaatg
ctgcagcgcgtgcgtgacagcaagggtgccaacggcggcgacggcgctggccgtggtggc
aatggcggcccgcgcagcaatgcaccccgcagtggcccccgtcccccgcaaggcgatggc
atggcgccgcgcccccaaggcgcacgtccaccccagggtggccgtggtggccgtccagcc
ggtcctggcggtgcacgcaccggtggtggcggctacggcggcggcaatggtggtggcagc
ggcggctatggcggcggcaacagctacggtggtggcggtaacggcaatggcggcggctat
ggcggcggtgcccagcctgaccacacgcgctctgcttcgatgggtggccagggccctgcg
ccccgccctgcccaaggcggccagcctgaccccatgcgtaccagcgtagacagcatgctc
gaccgcggtcgccgtggtggcttcggcggcggcaaccgcaatggcggtggtggtggcggc
ggctacggtggcggcaatggcggtgggaacggtggcggcggcttcggcggcggccgcagt
ggtggtggcggcggatcccgcggccccggtggcccccgtggttcgttcggacgctga
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