Rhodoferax sp. WC2427: AB3G31_16850
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Entry
AB3G31_16850 CDS
T10716
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3G31_16850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhof02000
]
AB3G31_16850
Transporters [BR:
rhof02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AB3G31_16850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
XDC18017
LinkDB
All DBs
Position
complement(3618237..3619307)
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AA seq
356 aa
AA seq
DB search
MKTQSQIFAAVAATLVLASQAQAAELTYALWGGSWQDAQEIVHTRPFAAKSGVTSKIASY
NGGIAQLRTQVQTGNVTWDIVDMQLSDSMRACDEGLLEKINPAQDLAPAKDGTPASADFL
PKGLNECLAGTIVWSTVLVYDKTKVGATEPAKVADFFDLKKYPGKRALRKSPEGALEWAL
LADGVPAAQVYTVLGTPAGVDRALKKLDTIKPSIVWWEAGSQPPQLLADGEVVMTSAYNA
RIYTAIVKDKKPFDFLWDGQLKNVEGYSIVKGTKNLKDAKAFVRFATEPERLAALAPLTA
YGPMRKSAVGMVDPKVAPYLPTTPKNQVGAVEVDATFWADHSDDLNQKFSAWLNRK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcaaagccaaattttcgcggcagtggccgccacgctggtgctggcatcgcaa
gcccaggctgccgaactgacctatgccctgtggggcggttcctggcaagatgcacaagaa
atcgttcacacgcggccctttgcggccaagtccggcgtgaccagcaagattgccagctac
aacggcggtattgcgcagctgcgcacccaggtccagaccggcaatgtcacctgggacatc
gtggacatgcagctgtcggactccatgcgcgcctgcgacgaaggtctgcttgaaaaaatc
aatcccgcccaagacctcgcgccagccaaggacggcacaccggcaagtgcagactttttg
cccaagggcctgaacgaatgcctggccggcacgatcgtgtggtccacggtactggtgtat
gacaagaccaaggtcggcgcgaccgaaccggccaaagtagccgacttcttcgacctcaag
aaatacccgggcaagcgcgccctgcgcaagtcgcctgagggggcactggagtgggccctg
ctcgcggacggcgttcctgcagcccaggtctacaccgtgttgggtacacctgccggggtg
gaccgggccttgaagaagctcgacaccatcaagccgtccatcgtgtggtgggaggccggt
tcccagccgccccaactcctggccgacggcgaggtggtcatgaccagtgcctacaacgca
cgcatctacaccgccatcgtgaaggacaaaaaaccgtttgatttcctctgggatgggcag
ctgaaaaacgtggagggctattccatcgtcaagggtacaaaaaacctgaaggatgcaaaa
gccttcgtacgctttgcgaccgagcccgagcgcctggctgcactcgcaccgctgaccgcc
tacggcccgatgcgcaagtcggccgttggcatggtggaccccaaggtggcgccttacctg
ccgaccacacccaagaaccaggttggcgcggtggaagtggacgcgaccttttgggccgac
cattcggacgacctgaaccagaagttctccgcctggttgaaccggaagtaa
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