Rhodoferax sp. WC2427: AB3G31_16855
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Entry
AB3G31_16855 CDS
T10716
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3G31_16855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhof02000
]
AB3G31_16855
Transporters [BR:
rhof02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AB3G31_16855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
nSTAND_NTPase5
DO-GTPase2
nSTAND3
AAA_25
AAA_22
AAA_33
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XDC18018
LinkDB
All DBs
Position
complement(3619365..3620441)
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AA seq
358 aa
AA seq
DB search
MDTIVSFKNVQKTYDGESLVVKNLNLDIREGEFLTMLGPSGSGKTTCLMMLAGFETATHG
QILLKEREINRIPPERRNIGMVFQSYALFPNMSVRENLAFPLKVRKLSQTEIADRVKKAL
AMVTMEKFADRMPGQLSGGQQQRIAVARALVFEPALVLMDEPLGALDKQLREQMQYEIKR
IHAQSGLTIVYVTHDQNEAMTMSDRIAVFNNGRIQQLASPSSLYESPDTAFVGRFIGESN
EMHGTVQSISGGFCALALENGVVLKAVVGPDIAVGSKASVLMRPEKVLVGAVAASCENNF
ESRVTDVIYYGDHLRLLCSVCGHQDFIVKIPNDGEAQRIQVGDALSVGWRAEASRALH
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatcgtttcttttaaaaatgttcagaaaacttacgatggagaatcgttggtt
gtcaagaatctcaacctcgacatccgcgaaggcgagttcctgacgatgctgggcccgtcc
ggctcgggcaagaccacctgcctgatgatgcttgccggatttgagaccgccacccacggc
cagatcctgttgaaggagcgggagatcaatcgcatcccgccggagcgccgcaacattggc
atggtgttccaaagctacgcgctgtttcccaatatgtcggtgcgggaaaacctggccttt
ccattgaaggtgcgcaagctgtcccagacggagatagcggatcgggtcaaaaaggccctt
gcaatggtcacgatggagaagtttgccgaccggatgccgggtcaactctcgggcggccag
caacagcgtattgccgttgcgcgggcactggtgtttgagcctgcactggtgttgatggac
gagccgttgggggctctggacaagcaattgcgcgagcagatgcaatatgaaatcaagcgt
atccacgcccaaagcggactgacgatcgtctacgtcacgcacgaccagaacgaggccatg
accatgtccgaccgcatcgcggttttcaacaacggtcgcatccagcaactcgcctcgccc
tcaagcctttacgagtctcccgataccgcattcgtgggccgctttatcggcgagagcaac
gagatgcacggcacggtccagtcgatttcgggtgggttctgtgcgttggccctggagaac
ggcgtggtgctgaaggcggtggtcgggcccgatatcgcggtggggtccaaggccagcgtg
ctgatgcgcccagagaaggtgctggtcggcgcggtggccgcctcgtgtgagaacaacttc
gaaagccgggtgacggatgtcatctattacggcgaccacctgcggctgctgtgcagcgta
tgtgggcaccaggatttcattgtgaagattccgaatgacggcgaggcgcagcgtatccag
gtgggcgatgcactttctgttggctggagggcggaggctagccgagctctgcattga
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