Rhodoferax sp. WC2427: AB3G31_17165
Help
Entry
AB3G31_17165 CDS
T10716
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof03030
DNA replication
rhof03410
Base excision repair
rhof03420
Nucleotide excision repair
rhof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3G31_17165 (polA)
03410 Base excision repair
AB3G31_17165 (polA)
03420 Nucleotide excision repair
AB3G31_17165 (polA)
03440 Homologous recombination
AB3G31_17165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhof03032
]
AB3G31_17165 (polA)
03400 DNA repair and recombination proteins [BR:
rhof03400
]
AB3G31_17165 (polA)
Enzymes [BR:
rhof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3G31_17165 (polA)
DNA replication proteins [BR:
rhof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB3G31_17165 (polA)
DNA repair and recombination proteins [BR:
rhof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB3G31_17165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3G31_17165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
XDC18077
LinkDB
All DBs
Position
complement(3689257..3692055)
Genome browser
AA seq
932 aa
AA seq
DB search
MTTQKTLLLVDGSSYLYRAFFAGGETMSTTLPDGTVQKTGAIRIIINMMNSLRKEVRADY
AVCVFDAKGPTFRDEWYPAYKATRSPMPDDLRTQIEPVHEVIRLMGWPVVAVPGVEADDV
IGTLARLAGDQGIEVVVSSGDKDLSQLVNQHVTIIDTMNGKRRDVAGVTEEFGVPPSLMV
DYQTLVGDTVDNVPGVPKVGPKTAAKWLMEYGSLDALMERATEIKGVAGENLRNAVDWLP
QGRRLVTIKTDCELSGYIDGLPAMDSIAYTAQDTDSLKAFYEKFGFKGLARNLDSAAAAE
PAPTAEKTPKAKPSEPGLFDEPGAATPVAPARTPGFETILTWEAFDAWLATLQTAELVAL
DTETNSIDEMVAEIVGISVCVTPGEAAYIPVGHNYPDAPTQLPRDEVLARLKPWLENPAM
LKLGQNIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVHKPHGLSSLAERHLGRSGISFED
LCGKGVHQLTINQVDVEKASEYACEDADMTLAVHRVLWPQLQAVPALAFIYQLEIDSSEA
LYRIERNGVLIDAATLASQSHALGQRIVQLENEAYEIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYTDKLALLILPRSGRVH
THYAQAVAVTGRLSSNDPNLQNIPVRTPEGRRVREAFVAAPGNVIASADYSQIELRIMAH
ISGDAALLRAFTDGLDVHRATAAEVFGVTVEQVTSEQRRYAKVINFGLIYGMSAYGLAKN
LGIDNTAAKNYIARYFDRYPGVKTYMEDTRALAKQQGYVETVFGRRLQLANIQSAKGAVL
AGLERAAINAPMQGTAADLIKLSMVAVQKALDSEQRATKMIMQVHDELVFEVPEAEVDWV
RVEIPRLMAGVAALKVPLLAEVGVGPNWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccaaaaaaccctgctgctggtcgacggctccagctacctgtaccgtgccttt
tttgccggtggtgaaaccatgagcaccaccttgcccgatggcacggtgcaaaaaaccggt
gccatccgcatcatcatcaacatgatgaacagcctgcgcaaagaggtgcgggccgactac
gcggtgtgcgtgttcgacgccaaaggccccaccttccgtgacgagtggtatcccgcctac
aaggccacccgcagccccatgcccgatgacctgcgcacgcagatcgagccggtgcacgag
gtcatccgcctgatgggctggccggtggtggccgtgccgggggtggaggccgacgacgtg
atcggcacgctggcccggctggctggcgaccagggcattgaggtggtggtgtccagtggc
gacaaggacctgagccaactggtcaaccaacacgtgaccatcatcgacaccatgaacggc
aagcgccgcgacgtggccggggtgaccgaggaattcggcgtaccccccagcctgatggtt
gactaccagaccctggtgggcgacaccgtggacaacgtgcccggcgtgcccaaggtcggc
cccaaaaccgccgccaagtggctgatggaatacggcagcctggacgcgctgatggagcgc
gccaccgagatcaagggcgtggccggggaaaacctgcgcaacgcggtggactggctgccg
cagggccgccgcctggtcaccatcaagaccgactgcgagctgtcgggctacatcgacggc
ctgcctgctatggattcaatagcttataccgcccaagatacggactctttgaaggctttt
tacgaaaagtttggcttcaagggcctggcccgcaacctggacagcgccgccgccgcagaa
cctgcccccacggcggagaagacgcccaaggccaagccgtccgagcccggcctgttcgac
gaacctggcgctgccacccctgtcgcgcccgcacgcaccccgggctttgaaaccatcctg
acctgggaggccttcgacgcctggctggccacgctgcaaaccgccgagctggtggcgctg
gacaccgagaccaactccatcgacgagatggtggccgagattgtcggcatcagcgtgtgc
gtgaccccgggcgaggccgcctacatcccggtcggccataactaccccgacgcgcccacc
cagttgccgcgtgacgaggtgctggcccggctcaagccctggctggaaaacccggccatg
ttgaaactgggccagaacatcaaatacgaccgccatgtgttcgccaaccacggcatcgaa
gtgcagggctacgcccacgacaccatgctgcaaagctatgtgctggaagtgcacaagccc
cacggcctgagcagcctggccgagcgccacctgggccgcagcggcatcagctttgaagac
ctgtgcggcaagggcgtgcaccagctcaccatcaaccaggtggatgtggaaaaagcctcg
gagtacgcctgcgaagacgccgacatgaccctggcggtgcaccgcgtgctctggccgcag
ctgcaggcggtgcccgccctggccttcatctaccagctggagatcgacagcagcgaggcg
ctctaccgcatcgaacgcaacggcgtgctgatcgacgcggccaccctggccagccagagc
cacgccctgggccagcgcatcgtgcaactggaaaacgaggcctacgagattgcgggccag
cccttcaacctcagcagccccaagcagctgggcgaaatcttcttcgacaaactgggcatg
ccggtggtcaagaaaaccgccaccggcgcgcgcagcaccgacgaagaggtgctggaaaag
ctggccgaggactaccccctgcccgccaagctgctggagcaccgcagcctgtccaagctc
aaaggcacctacaccgacaagctggccctgctgatcctgccgcgcagcggccgcgtgcac
acccactacgcccaggccgtggccgtcaccgggcggctcagcagcaacgaccccaacttg
caaaacatccccgtgcgcacccccgagggccgccgcgtgcgcgaggcctttgtggccgca
cccggcaacgtgatcgccagcgccgactactcgcagatcgagctgcgcatcatggcccac
atcagtggcgacgccgccctgctgcgcgcctttaccgacgggctggacgtgcaccgcgcc
acggcggccgaggtgtttggtgtcacggtggagcaggtcaccagcgagcagcgccgctac
gccaaggtgatcaactttggcctgatctacggcatgagcgcctacggcctggccaagaac
ctgggcatcgacaacaccgccgccaagaactacatcgcccgctacttcgaccgctacccg
ggtgtcaaaacctacatggaagacacccgcgcactggccaagcagcagggctacgtggaa
accgtgtttggccggcgcctgcaactggccaacatccagagcgccaagggcgcggtgctg
gcgggcctggagcgcgccgccatcaacgcccccatgcagggcacggccgccgacctgatc
aagctcagcatggtggcggtgcaaaaggcgctggattccgagcagcgcgccaccaagatg
atcatgcaggtgcacgatgaactggtgtttgaagtgcccgaggccgaggtggactgggtc
cgggtcgagatcccgcggctgatggccggtgtggccgcgctcaaagtgccgctattggcc
gaagtgggcgtgggccccaactgggacaaagcccactga
DBGET
integrated database retrieval system
