KEGG   Rhodoferax sp. WC2427: AB3G31_18175
Entry
AB3G31_18175      CDS       T10716                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rhof  Rhodoferax sp. WC2427
Pathway
rhof00260  Glycine, serine and threonine metabolism
rhof00460  Cyanoamino acid metabolism
rhof00630  Glyoxylate and dicarboxylate metabolism
rhof00670  One carbon pool by folate
rhof00680  Methane metabolism
rhof01100  Metabolic pathways
rhof01110  Biosynthesis of secondary metabolites
rhof01120  Microbial metabolism in diverse environments
rhof01200  Carbon metabolism
rhof01230  Biosynthesis of amino acids
rhof01240  Biosynthesis of cofactors
rhof04981  Folate transport and metabolism
Module
rhof_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:rhof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    AB3G31_18175 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    AB3G31_18175 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AB3G31_18175 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    AB3G31_18175 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    AB3G31_18175 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    AB3G31_18175 (glyA)
Enzymes [BR:rhof01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     AB3G31_18175 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1 Beta_elim_lyase Cys_Met_Meta_PP DUF5695
Other DBs
NCBI-ProteinID: XDC18272
LinkDB
Position
3902291..3903565
AA seq 424 aa
MTTESFFSVGVAQADPAINAAMDHELQRQREQIELIASENIVSKAVLEAQGSVLTNKYAE
GYPGKRYYGGCEHVDVVEALAIERLCKLFGCEYANVQPHSGAQANTAVMLALVQPGDTVL
GMSLSAGGHLTHGAKPALSGKWFKAVQYGVRRADSLIDYDEVEALAVEHQPKMIIAGFSA
YPRTIDWARFRAIADKVGAYLMVDMAHVAGLVATGVYPSPVPHAHVTTSTTHKTLRGPRG
GVILTNDEALSKKINSAVFPGSQGGPLMHVIAAKAVAFGEALQPSFKAYTQQVVANAKAL
GAVLKAGGLDLVTGGTDNHLLLVDLRPLGLKGNTTEVALERAGITCNKNGIPFDDEKPTV
TSGIRVGTAAGTTRGFGVAEFEEVGRLMLEVFNSLKTKPEGDAALEASVYARVKALTARF
PLYA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgacaaccgaaagcttcttctccgtgggtgtggcccaggccgaccccgccatcaacgcc
gccatggaccacgaactgcaacgccagcgcgaacagatcgaactgatcgcctcggaaaac
attgtctccaaagcggtgctcgaagcccagggctcggtgctgaccaacaagtacgccgaa
ggctaccccggcaagcgctactacggcggctgcgagcatgtggatgtggtcgaagccctg
gccattgagcgcctgtgcaagctgtttggctgcgaatatgccaacgtacagccgcactcc
ggtgcccaggccaacacggccgtgatgctggcgctggtacagcctggtgacaccgtgctg
ggcatgtcgctgtcggcaggcggccatttgacgcacggtgccaaaccggcgctgtcgggc
aaatggttcaaggccgtgcagtacggcgtgcgccgtgccgattcgctgatcgactacgac
gaagtcgaagccctggcagtggaacaccagcccaagatgatcattgccggcttctcggcc
tacccccgcaccatcgactgggcgcgtttccgggccatcgccgacaaggtgggtgcctac
ctgatggtggacatggcccacgtggccggtctggtcgctaccggcgtgtaccccagcccg
gtgccgcacgcccacgtaaccacctccaccacccacaagaccctgcgcggcccccgtggt
ggcgtgattctgaccaacgatgaagccctgtcgaagaagatcaactccgccgtgtttccc
ggttctcagggcggcccgctgatgcacgtgattgccgccaaggccgtggcctttggcgaa
gccctgcaacccagcttcaaggcctacacccagcaggtcgtggccaatgccaaggccctg
ggcgcggtgctcaaggccggtggcctggacctggtcaccggtggcaccgacaaccacctg
ctgctggtcgatctgcgccccctgggcctgaaaggcaacaccaccgaagtggcgttggag
cgcgcaggcatcacctgcaacaagaacggcataccgttcgacgacgagaagcccaccgtc
acctcgggtatccgcgtcggcacggcagcgggcaccacccgcggcttcggcgtggccgag
tttgaagaggtaggccgcctgatgctggaagtattcaacagcctgaagaccaaacccgaa
ggcgacgccgccctggaggcgtcggtctacgcccgcgtcaaagccctcaccgcccgtttc
cccctttacgcctga

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