Rhodoferax sp. WC2427: AB3G31_18175
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Entry
AB3G31_18175 CDS
T10716
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof00260
Glycine, serine and threonine metabolism
rhof00460
Cyanoamino acid metabolism
rhof00630
Glyoxylate and dicarboxylate metabolism
rhof00670
One carbon pool by folate
rhof00680
Methane metabolism
rhof01100
Metabolic pathways
rhof01110
Biosynthesis of secondary metabolites
rhof01120
Microbial metabolism in diverse environments
rhof01200
Carbon metabolism
rhof01230
Biosynthesis of amino acids
rhof01240
Biosynthesis of cofactors
rhof04981
Folate transport and metabolism
Module
rhof_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB3G31_18175 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AB3G31_18175 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB3G31_18175 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AB3G31_18175 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AB3G31_18175 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AB3G31_18175 (glyA)
Enzymes [BR:
rhof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AB3G31_18175 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
DUF5695
Motif
Other DBs
NCBI-ProteinID:
XDC18272
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Position
3902291..3903565
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AA seq
424 aa
AA seq
DB search
MTTESFFSVGVAQADPAINAAMDHELQRQREQIELIASENIVSKAVLEAQGSVLTNKYAE
GYPGKRYYGGCEHVDVVEALAIERLCKLFGCEYANVQPHSGAQANTAVMLALVQPGDTVL
GMSLSAGGHLTHGAKPALSGKWFKAVQYGVRRADSLIDYDEVEALAVEHQPKMIIAGFSA
YPRTIDWARFRAIADKVGAYLMVDMAHVAGLVATGVYPSPVPHAHVTTSTTHKTLRGPRG
GVILTNDEALSKKINSAVFPGSQGGPLMHVIAAKAVAFGEALQPSFKAYTQQVVANAKAL
GAVLKAGGLDLVTGGTDNHLLLVDLRPLGLKGNTTEVALERAGITCNKNGIPFDDEKPTV
TSGIRVGTAAGTTRGFGVAEFEEVGRLMLEVFNSLKTKPEGDAALEASVYARVKALTARF
PLYA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgaaagcttcttctccgtgggtgtggcccaggccgaccccgccatcaacgcc
gccatggaccacgaactgcaacgccagcgcgaacagatcgaactgatcgcctcggaaaac
attgtctccaaagcggtgctcgaagcccagggctcggtgctgaccaacaagtacgccgaa
ggctaccccggcaagcgctactacggcggctgcgagcatgtggatgtggtcgaagccctg
gccattgagcgcctgtgcaagctgtttggctgcgaatatgccaacgtacagccgcactcc
ggtgcccaggccaacacggccgtgatgctggcgctggtacagcctggtgacaccgtgctg
ggcatgtcgctgtcggcaggcggccatttgacgcacggtgccaaaccggcgctgtcgggc
aaatggttcaaggccgtgcagtacggcgtgcgccgtgccgattcgctgatcgactacgac
gaagtcgaagccctggcagtggaacaccagcccaagatgatcattgccggcttctcggcc
tacccccgcaccatcgactgggcgcgtttccgggccatcgccgacaaggtgggtgcctac
ctgatggtggacatggcccacgtggccggtctggtcgctaccggcgtgtaccccagcccg
gtgccgcacgcccacgtaaccacctccaccacccacaagaccctgcgcggcccccgtggt
ggcgtgattctgaccaacgatgaagccctgtcgaagaagatcaactccgccgtgtttccc
ggttctcagggcggcccgctgatgcacgtgattgccgccaaggccgtggcctttggcgaa
gccctgcaacccagcttcaaggcctacacccagcaggtcgtggccaatgccaaggccctg
ggcgcggtgctcaaggccggtggcctggacctggtcaccggtggcaccgacaaccacctg
ctgctggtcgatctgcgccccctgggcctgaaaggcaacaccaccgaagtggcgttggag
cgcgcaggcatcacctgcaacaagaacggcataccgttcgacgacgagaagcccaccgtc
acctcgggtatccgcgtcggcacggcagcgggcaccacccgcggcttcggcgtggccgag
tttgaagaggtaggccgcctgatgctggaagtattcaacagcctgaagaccaaacccgaa
ggcgacgccgccctggaggcgtcggtctacgcccgcgtcaaagccctcaccgcccgtttc
cccctttacgcctga
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