Rhodoferax sp. WC2427: AB3G31_18785
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Entry
AB3G31_18785 CDS
T10716
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB3G31_18785 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhof03400
]
AB3G31_18785 (ruvB)
Enzymes [BR:
rhof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3G31_18785 (ruvB)
DNA repair and recombination proteins [BR:
rhof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB3G31_18785 (ruvB)
RecFOR pathway proteins
AB3G31_18785 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
nSTAND3
TIP49
AAA_16
AAA_14
AAA_22
AAA_3
Rad17
RNA_helicase
NTPase_1
Bac_DnaA
TsaE
AAA_18
AAA_33
DUF815
Sigma54_activ_2
ABC_tran
AAA_17
AAA_28
AAA_PrkA
AAA_24
NB-ARC
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XDC18388
LinkDB
All DBs
Position
complement(4031976..4033037)
Genome browser
AA seq
353 aa
AA seq
DB search
MSIQTDDFAAPPPKRMVSAAPTSPQEEAIERALRPKLFDDYVGQTKAREQLEIFIGAATK
RGEALDHVLLFGPPGLGKTTLSHIIAHELGVNLRQTSGPVLEKPKDLAALLTNLEKNDVL
FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNP
LRDRFGIVARLEFYTPEELARIVKRSAGLLNAPMDADGGFEIARRSRGTPRIANRLLRRV
RDYADVKGTGTITLDIANRALAMLDVDPQGFDLMDRKLLEAVIHRFDGGPVGLDNIAASI
GEERDTIEDVIEPYLIQQGFLQRTNRGRIATLAAYRHLGVTPPQTEGGLFSVD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgtccatccagactgatgattttgccgcgccgcccccgaagcgcatggtttctgccgcc
cccacctcgccgcaagaggaggcgatcgaacgcgccctgcgccccaagctgttcgacgac
tacgtgggccagaccaaggcccgcgagcagctggagatcttcatcggtgccgccaccaag
cgcggcgaggcgctggaccacgtgctgctgttcggcccgcccggcctgggtaaaaccacg
ctcagccacatcattgcccacgaactgggcgtgaacctgcgccagaccagcggcccggtg
ctcgaaaagcccaaggacctggccgcgctgctgaccaatctggaaaaaaacgacgtactc
ttcattgacgaaatccaccggctcagccccgtggtggaagaaatcctgtaccccgcgctg
gaggactaccagatcgacatcatgatcggcgagggcccggcggcccgcagcatcaagctc
gatctgcagcccttcaccctggtgggggccaccacccgcgccggcatgctgaccaacccg
ctgcgcgaccgctttggcatcgtggcgcggctggagttctacacgcccgaagaactggcc
cgcatcgtcaagcgcagcgccgggctgctcaatgcccccatggatgccgatggcggcttc
gagatcgcccgccgctcgcgtggcacgccgcgtatcgccaaccgcctgctgcgccgcgtg
cgcgactacgccgacgtgaagggcaccggcaccatcaccctggacatcgccaaccgcgcc
ctggccatgctggacgtggacccgcaaggctttgacctgatggaccgcaaactgctggag
gcggtgatccaccgcttcgacggtggcccggtggggctggacaacatcgccgccagcatc
ggcgaagagcgcgacaccatcgaagacgtgatcgagccgtatttgatccagcagggcttt
ttgcagcgcaccaaccgcggccgcatcgccaccctggccgcctaccggcatttgggcgtg
accccaccgcagaccgagggtgggctgttttctgtagattaa
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