Rhodoferax sp. WC2427: AB3G31_19675
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Entry
AB3G31_19675 CDS
T10716
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhof Rhodoferax sp. WC2427
Pathway
rhof00300
Lysine biosynthesis
rhof00470
D-Amino acid metabolism
rhof01100
Metabolic pathways
rhof01110
Biosynthesis of secondary metabolites
rhof01120
Microbial metabolism in diverse environments
rhof01230
Biosynthesis of amino acids
Module
rhof_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB3G31_19675 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB3G31_19675 (dapF)
Enzymes [BR:
rhof01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AB3G31_19675 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
XDC18564
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Position
complement(4229946..4230827)
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AA seq
293 aa
AA seq
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MHIPFTKMQGAGNDFVVLDETQGRLGLSREQYRFLADRHFGVGADQILSVRAASAPGIDF
EYAIHNADGGEVEHCGNGARCFMRFVHSRGLTTQRSVRVQTMERVLQLNMQPDGRVTVDM
GLPVFDLAQIPFDPQGLQPVAAHTWQKWPLVLIPSAQEAIESVAVVSMGNPHAVLLVDDV
DAAPVQTTGPLVQAQPCFPNGVNVGFMQVVNRGHVRLRVFERGAGETLACGTGACAAVVA
GIRLGLLDARVDVDTRGGPLTIEWEGLGQPVRMTGPATTVFDGSITIPDSISP
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcacattccattcaccaaaatgcagggcgcgggcaacgactttgtggtgctcgacgag
acccagggccgcctgggcctgagccgggagcagtaccgctttctggccgaccgccacttc
ggcgtgggcgcagaccagattttgtcggtgcgcgccgccagcgccccgggcatcgacttc
gagtacgccatccacaacgccgacggcggcgaggtggagcactgcggcaatggcgcgcgc
tgcttcatgcgcttcgtccacagccgggggctgaccacccagcgcagcgtgcgggtgcaa
accatggagcgcgtgctgcagctgaacatgcagcccgatggccgcgtgacggtggacatg
ggcctgccggtgttcgacctggcgcagattcctttcgatccgcaaggcctgcagcccgtg
gctgcccatacatggcaaaaatggcctctagtgcttattccatcggcgcaagaagctatt
gaaagcgtagcagttgtgtccatgggcaatccgcatgccgtgctgctggtggacgatgtg
gatgcggccccggtacagaccaccggcccgctggtgcaggcccagccctgtttccccaac
ggggtcaatgtcggcttcatgcaggtggtgaaccgcggccacgtccgcctgcgggtgttc
gagcgcggcgcgggcgagaccctggcctgcggtaccggcgcgtgcgctgcggtggtggcg
ggcatccgcctgggcctgctggacgcgcgggtcgatgtagacacccgtggcggccccctg
accatcgagtgggagggcctgggccagcccgtgcgcatgaccggcccggccaccaccgta
ttcgacggcagcattaccattccagactccatttccccatga
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