KEGG   Rhodoferax sp. WC2427: AB3G31_19675
Entry
AB3G31_19675      CDS       T10716                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rhof  Rhodoferax sp. WC2427
Pathway
rhof00300  Lysine biosynthesis
rhof00470  D-Amino acid metabolism
rhof01100  Metabolic pathways
rhof01110  Biosynthesis of secondary metabolites
rhof01120  Microbial metabolism in diverse environments
rhof01230  Biosynthesis of amino acids
Module
rhof_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhof00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AB3G31_19675 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AB3G31_19675 (dapF)
Enzymes [BR:rhof01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     AB3G31_19675 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: XDC18564
LinkDB
Position
complement(4229946..4230827)
AA seq 293 aa
MHIPFTKMQGAGNDFVVLDETQGRLGLSREQYRFLADRHFGVGADQILSVRAASAPGIDF
EYAIHNADGGEVEHCGNGARCFMRFVHSRGLTTQRSVRVQTMERVLQLNMQPDGRVTVDM
GLPVFDLAQIPFDPQGLQPVAAHTWQKWPLVLIPSAQEAIESVAVVSMGNPHAVLLVDDV
DAAPVQTTGPLVQAQPCFPNGVNVGFMQVVNRGHVRLRVFERGAGETLACGTGACAAVVA
GIRLGLLDARVDVDTRGGPLTIEWEGLGQPVRMTGPATTVFDGSITIPDSISP
NT seq 882 nt   +upstreamnt  +downstreamnt
atgcacattccattcaccaaaatgcagggcgcgggcaacgactttgtggtgctcgacgag
acccagggccgcctgggcctgagccgggagcagtaccgctttctggccgaccgccacttc
ggcgtgggcgcagaccagattttgtcggtgcgcgccgccagcgccccgggcatcgacttc
gagtacgccatccacaacgccgacggcggcgaggtggagcactgcggcaatggcgcgcgc
tgcttcatgcgcttcgtccacagccgggggctgaccacccagcgcagcgtgcgggtgcaa
accatggagcgcgtgctgcagctgaacatgcagcccgatggccgcgtgacggtggacatg
ggcctgccggtgttcgacctggcgcagattcctttcgatccgcaaggcctgcagcccgtg
gctgcccatacatggcaaaaatggcctctagtgcttattccatcggcgcaagaagctatt
gaaagcgtagcagttgtgtccatgggcaatccgcatgccgtgctgctggtggacgatgtg
gatgcggccccggtacagaccaccggcccgctggtgcaggcccagccctgtttccccaac
ggggtcaatgtcggcttcatgcaggtggtgaaccgcggccacgtccgcctgcgggtgttc
gagcgcggcgcgggcgagaccctggcctgcggtaccggcgcgtgcgctgcggtggtggcg
ggcatccgcctgggcctgctggacgcgcgggtcgatgtagacacccgtggcggccccctg
accatcgagtgggagggcctgggccagcccgtgcgcatgaccggcccggccaccaccgta
ttcgacggcagcattaccattccagactccatttccccatga

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