Rhodoferax sp. WC2427: AB3G31_20600
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Entry
AB3G31_20600 CDS
T10716
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rhof Rhodoferax sp. WC2427
Brite
KEGG Orthology (KO) [BR:
rhof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhof03009
]
AB3G31_20600 (dbpA)
Enzymes [BR:
rhof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AB3G31_20600 (dbpA)
Ribosome biogenesis [BR:
rhof03009
]
Prokaryotic type
rRNA helicases
AB3G31_20600 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
ERCC3_RAD25_C
YlmH_RBD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
XDC18739
LinkDB
All DBs
Position
4426139..4427554
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AA seq
471 aa
AA seq
DB search
MTTPNKTPAATDFSSLPLAPAMLANLEQLGYLQMTPIQAASLPLALLGQDLIAQAMTGSG
KTAAFALALLANLNARRFAVQAMVLCPTRELADQVSVEIRRLARAEENIKVVTLCGGVAL
RGQNASLEHGAHIVVGTPGRIMDHLERGHLDLSALNTLVLDEADRMLDMGFFEDMATVIK
QCPKERQTLLFSATYPEGIEKLSQQFMRQPKSITVQAQHATTQIAQRWYQVEKSERLATV
GKLLNHFRPASTLAFCNTKLQCRALVAALQAEGFSALALYGELEQRERDQVLVQFANRSC
SVLVATDVAARGLDIADLAAVINVDVTPDSEVHIHRIGRTGRAGAEGLALNLASMNEMGF
VGKIEVLQNRESEWHKLEELTPTSKEPLRPPMMTLQITGGRKEKIRAGDVLGALTGDAGY
TREQIGKINVNEYSTYVAVDRRIAHEAERKLNAGKIKGKSVRVRLMTGDDE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgactacaccgaacaagacacccgccgccaccgatttcagcagcctgccgctggccccc
gccatgctggccaacctggagcagctcgggtatttgcaaatgacgccgatccaggccgcc
agcctgccgctggcgctgctggggcaagatttgattgcccaggccatgaccggcagcggc
aaaaccgccgccttcgccctggccctgctggccaacctgaacgcccgccgctttgccgtg
caggccatggtgctgtgccccacgcgcgagctggccgaccaggtgagcgtggagatccgc
cgcctggcccgcgcggaggaaaacatcaaggtggtgaccctgtgtggcggcgtggccctg
cgcgggcaaaacgccagcctggagcacggcgcgcacatcgtggtgggcacgccgggccgc
atcatggaccacctggagcgcggccacctggacctgtcggccctgaacaccctggtgctg
gacgaggccgaccgcatgctggacatgggcttttttgaagacatggccaccgtcatcaag
cagtgccccaaagagcgccagacgctgctgttctcggccacctaccccgagggcatcgag
aaactgagccagcagttcatgcgccagcccaagagcatcaccgtgcaggcgcagcacgcc
accacccagatcgcccagcgctggtaccaggtggaaaaatccgagcgcctggccaccgtg
ggcaagctgctgaaccacttccgcccggccagtacgctggcgttttgcaataccaagctg
cagtgccgcgccctggtagccgccctgcaggccgaaggcttcagcgcgctggcgctgtac
ggcgaactggagcagcgcgagcgcgaccaggtgctggtgcagtttgccaaccgcagctgc
agcgtgctggtggccaccgacgtggccgcacgcgggctggacattgccgacctggccgcc
gtgatcaacgtggacgtgacgcccgactccgaagtgcacatccaccgcattggccgcacc
ggccgtgccggggccgagggcctggcgttgaatctggcttcgatgaacgagatgggcttt
gtcggcaagatcgaggtgctgcaaaaccgcgaatccgaatggcacaagctggaggagctg
acccccaccagcaaggagccgctgcgcccgcccatgatgacgctgcaaatcaccggcggc
cgcaaggaaaagatccgcgcgggcgacgtgctgggcgcgctgaccggcgacgcaggctac
acccgcgagcagatcggcaagatcaatgtgaacgaatactccacctacgtggcggtagac
cgccgcatcgcccatgaggccgagcgcaagctcaacgcgggcaagatcaagggcaagagc
gtgcgcgtgcgcctgatgaccggcgacgacgagtaa
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