Rhodoferax sp. WC2427: AB3G31_21035
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Entry
AB3G31_21035 CDS
T10716
Name
(GenBank) DEAD/DEAH box helicase
Organism
rhof Rhodoferax sp. WC2427
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
XDC18822
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All DBs
Position
4510208..4513627
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AA seq
1139 aa
AA seq
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MATVGGLWFNPRNLGNYVTDAVLERGLTLYRGQKVLDIEVRAIDNGRWQLTGSVQGSERT
PYKQSIRLHINVHGMLTHWDAECSCPVGVDCKHAVALSLKAAYRTQATVNATPPKPPTDA
ELAAARLAAEQRTRDAAALKVRQWLAQFDALDRRSSPHPDSAQAESFVYTLCPGTTQQKT
QLLQLQLQKTYLKKNGEWAKPKNILTPPYPGHPLFDAASPAEQELLRMLKGLASGSNHYA
YALTHCAVVEGAAGLLALQMASDTGRLFTVADGGFLGAPLRWSTPRELDWSWQQAPQPLA
SEPVWTLQSRLAHSSDNAQVYANHPALYLDAAQGLCGVAQTQGIAPEQLPLLLNAPPMPQ
SAIEPLQLPLTRRLAAVAMPPTLKPLPTVQGVVPTGHLHLVPVGKKDEPTYGLLWARLEF
DYAGLRGGWDNSDASVIVSHLGQRTLLVRDLPTEQALDARLTAHGLQGTPNAGYFLPGPQ
SQQTWLDWADTDFAAFRADGFTVTRDDALTDWLQRADALDVQMQAQNANDPDASPWFDLS
LGMEINGERHNILPWLPSLLNQLANAPTDEASGERVLPPFVYMRKPDDSFIRVPTEPLRP
WLAALLELVGDRQHDLDGDSLRLSRMEALRAGAALGEGAVWTGASALQELVAQLAGRSAL
PEVPLPEGVHASLRPYQQQGLNWLQFLRRAGLNGILADDMGLGKTLQTLAHIQVEKDAGR
LTNPALIIAPVSLMGNWQREAQRFCPGLRTLVLHGQDRHEVADTTHEHDVVIAPYSLLQR
DREGWLQAPWHIVVLDEAQNIKNASTLAAQVVAELQTQHRLALSGTPMENHLGEIWSLFH
FLMPGFLGSQAKFGSLFRTPIEKRGDTERLAQLRSRITPFMLRRTKALVAHELPPKVETV
MRVELEGPQADLYEAIRLTTEKAVREALDSKGLAKSHITILDALLKLRQVCCDPGLLKLE
SAKKVSRSAKLDQLMEILPEMLAEGRKVLLFSQFTSMLERIEAELKARAIPWVKLTGQSQ
KRDQIIDRFTSGAVPLFLISLKAGGVGLNLPQADTVIHYDPWWNPAVETQATDRAHRIGQ
TQSVWVVKLVAQGTIEERILALQERKAALAESMYSGAQGRKEPLFSEDDLQELLRPLSK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtcggcggcctctggttcaacccccgcaatctcggcaactacgtcaccgac
gctgtcctggagcggggcttgaccctgtaccggggccagaaggtgctggacatcgaagtc
cgggccatcgacaacggccgctggcagctcaccggcagcgtgcagggcagcgaacgcacc
ccgtacaaacaaagcatccgcctgcacatcaacgtgcacggcatgctgacgcactgggac
gccgagtgcagctgcccggtgggcgtggactgcaagcacgcggtggccctgtcgctcaag
gccgcctaccgcacccaggccacggtcaacgccacgccgcccaagccccccaccgatgcc
gaactggctgccgcccgcctggctgccgagcagcgcacccgcgatgccgccgcgctcaag
gtacgccaatggctggcccagtttgacgcgctggaccggcgcagcagcccccacccggac
agtgcccaggccgagagctttgtctacaccttgtgccccggcaccacgcagcaaaaaacc
cagctgctgcaattgcagttgcaaaaaacctacctgaagaaaaacggcgagtgggccaag
cccaagaacatcctcaccccgccctaccccggccacccgctgtttgacgcggccagcccc
gccgagcaagagctgctgcgcatgctcaagggcctggccagcggctccaaccactacgcc
tatgccctgacccactgcgccgtggtggagggcgctgccgggctgctggcgctgcaaatg
gcctccgacaccgggcgcttgttcaccgtggccgacggcggctttctgggcgcgccgctg
cgctggtccaccccccgggagttggactggagctggcagcaagccccccagccgctggcc
agcgaaccggtgtggacgctgcaatcgcggctggcccacagctccgacaacgcccaggtc
tacgccaaccacccagccctgtacctggatgccgcccagggcctgtgcggcgtggcccag
acccagggcatcgcccccgagcaactgccgctgttgctgaacgccccgcccatgccgcag
tcggccatcgagccgctgcagttgccactgacccgccgcctggccgcggtggccatgcca
cccaccctcaaaccgctacccaccgtgcagggcgtggtgcctacgggccacctgcacctg
gtgccggtcggcaaaaaggacgagcccacctacggactgctgtgggcccggctggaattc
gactacgccgggctgcgcggtggctgggacaattcggacgccagcgtgatcgtctcgcac
ctgggccagcgcaccctgctggtccgcgacctgcccaccgagcaggccttggatgcccgg
ctgacggcccacggtctgcagggcacgcccaatgcaggctattttttgcccggtccgcag
agccaacaaacctggctggactgggccgacaccgactttgccgccttccgtgccgacggc
tttaccgtcacccgcgacgacgcgctcaccgactggctgcagcgcgccgatgccctcgac
gtgcaaatgcaggcccagaatgccaacgacccggacgcatcgccctggttcgacctgtcc
ctgggcatggaaatcaacggcgaacgccacaacatcctgccctggctgcccagcctgctg
aaccagctggccaacgccccgacggacgaggccagcggcgaacgcgtgctgccgccgttt
gtctacatgcgcaagcccgacgacagcttcatccgcgtgcccaccgagcccctgcgcccc
tggctggccgccctgctggagctggtgggcgaccgccagcacgacctcgacggcgacagc
ctgcgcctgagccgcatggaagccctgcgcgccggggccgccctgggcgaaggcgcagtg
tggaccggggccagcgccctgcaggagctggtggcccaactggcaggccgcagcgccctg
cccgaagtgccgctgcccgagggcgtgcacgccagcctgcgcccctaccagcagcagggc
ctgaactggctgcagttcctgcgccgcgcggggctgaacggcatcctggccgacgacatg
ggcctgggcaaaaccctgcagacactggcccacatccaggtggaaaaagacgcgggccgc
ctgaccaacccggccctcatcattgccccggtcagcctgatgggcaactggcaacgcgaa
gcccagcgcttctgtcccggcctgcgcaccctggtgctgcacggccaggaccgccacgag
gtagccgacaccacgcacgagcacgacgtggtcatcgccccctattcgctgctgcagcgc
gaccgcgaaggctggctgcaagccccctggcacatcgtggtgctggacgaagcccagaac
atcaagaacgccagcaccctggccgcacaggtggtggccgagctgcaaacccagcaccgc
ctggcgctgagcggcacgccgatggaaaaccacctgggcgagatctggagcctgttccac
tttctgatgcccggtttcctgggcagccaggccaagttcggcagcctgttccgcaccccc
atcgagaagcgcggcgacaccgagcggctggcgcagctgcgcagccgcatcacgcctttc
atgctgcgccgtaccaaggccctggtggcgcacgagctgccgcccaaggtggaaaccgtg
atgcgcgtcgagctggaaggcccgcaggccgacctgtacgaggccatccgcctgaccacc
gagaaggcggtgcgcgaggcgctggacagcaagggcctggccaagtcgcacatcaccatc
ctggacgcgctactcaagctgcgccaggtgtgctgcgacccgggcctgctgaagctggag
tcggccaaaaaagtcagccgctccgccaagctcgaccagctgatggagatcctgcccgag
atgctggccgagggccgcaaggtgctgctgttttcgcagttcaccagcatgctggagcgc
atcgaggccgagctcaaggcccgcgccatcccctgggtcaagctcaccggccagtcgcaa
aagcgcgaccaaatcatcgaccgattcaccagcggtgccgtgccgctgtttctcatcagc
ctgaaagccggtggcgtgggcctgaacctgccgcaggccgacaccgtgatccattacgac
ccctggtggaaccccgccgtggaaacccaggccaccgaccgcgcccaccgcatcggccag
acgcagagcgtgtgggtggtgaaactggtggcgcagggcaccatcgaagaacgcatcctg
gccctgcaagagcgcaaagccgcgctggccgagagcatgtacagcggtgcccagggccgc
aaggagccgctgttctcggaagacgatttgcaggagctgctgagaccgctatcgaaataa
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