Rhodoferax sp. GW822-FHT02A01: AAGF34_08570
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Entry
AAGF34_08570 CDS
T11686
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhog Rhodoferax sp. GW822-FHT02A01
Brite
KEGG Orthology (KO) [BR:
rhog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhog03032
]
AAGF34_08570 (gyrB)
03400 DNA repair and recombination proteins [BR:
rhog03400
]
AAGF34_08570 (gyrB)
Enzymes [BR:
rhog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AAGF34_08570 (gyrB)
DNA replication proteins [BR:
rhog03032
]
Prokaryotic type
DNA Topoisomerases
AAGF34_08570 (gyrB)
DNA repair and recombination proteins [BR:
rhog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAGF34_08570 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
LysM
Motif
Other DBs
NCBI-ProteinID:
XAF51176
LinkDB
All DBs
Position
complement(1802444..1805044)
Genome browser
AA seq
866 aa
AA seq
DB search
MTDSNKPDSTPENTDAVHTGEGGAESSNFQPTIDAHQAGASEAYGEGSIQILEGLEAVRK
RPGMYIGDTSDGTGLHHLVFEVVDNSIDESLAGHCDDILVTIHSDNSVSVVDNGRGIPTG
VKMDDKHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKMLRLTIRRD
GKVHVMEFSKGFVQNRIVETQNGVEVSPMKVIGETERRGTEVHFLPDTEIFKENNDFHYE
ILSKRLRELSFLNNGVRIRLKDERTGKEDDFAGAGGVQGFVNFINKGKTVLHPNVFHAMG
DRQSDQGTNIGVEVAMQWNSGYNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIDES
ELAKKAKVEVSGDDMREGLTCVLSVKVPEPKFSSQTKDKLVSSEVRGPVEDIVSKLLADY
LQERPNDAKIIVGKIIEAARAREAARKARDMTRRKGVLDGMGLPGKLADCQEKDPAMCEI
YIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGK
AGGSTGNDDFNVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPP
LYKVKAGKEELYLQGPSELDSFLLRIALVNASVYTGGPNGTTLSGDTLAELARKHQVAQS
VIARLQNFMDAEALRSVADGVALNLDTVADAEASAAALQAKLPDAEVAGEFDVRTDKPIL
RISRRHHGNVKSSVLTQDFVHGADYHALADAANTFKGLLSEGARVMRGEGERQKEEKVND
FREAMAWLIGQAESSTSRQRYKGLGEMNPSQLWETTMDPTVRRLLRVQIDDAIEADRVFT
MLMGDEVEPRRDFIETNALRAGNIDV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgactgatagcaacaagcctgattccacccccgaaaacacggacgcagtgcacaccggt
gagggcggcgcggagagttccaacttccagcccaccatcgacgcgcaccaggcaggcgca
tcagaagcctatggcgagggctcgatccagattctcgaaggcctggaagccgtgcgcaag
cgccctggcatgtacatcggtgacacgtctgacggcaccggcctgcaccacctggtgttt
gaagtggtggacaactccatcgacgagtcgctggcaggccactgcgatgacatcctggtc
accatccactccgacaactcggtgagcgtggtggacaacggccgcggcattccgaccggc
gtgaagatggatgacaagcacgagcccaaacgctcggcggccgaaatcgccctgaccgag
ctgcatgccggcggcaagttcaaccaaaacagctacaaggtgtctggcggtctgcacggc
gtgggcgtgagctgcgtgaacgcgctctccaagatgctgcgcctgaccattcgtcgcgat
ggcaaagtgcatgtaatggagttcagcaagggctttgtgcagaaccgcattgtcgagaca
caaaacggcgtggaagtctcgcccatgaaggtgatcggtgaaaccgagcgacgcggcacc
gaggtgcacttcctgcctgacaccgaaatcttcaaagagaacaacgacttccactacgaa
atcctgagcaagcgcctgcgcgaactcagcttcctgaacaatggcgtgcgcatccgcctg
aaagacgaacgcacgggcaaggaagacgactttgccggtgccggaggcgtgcagggcttt
gtgaatttcatcaacaagggcaagaccgtcctgcaccccaacgtgttccacgccatgggc
gaccgccagagcgatcagggcaccaacatcggcgtcgaagtggccatgcaatggaacagc
ggctacaacgagcaggtgctgtgcttcaccaacaacattccccaacgggacggtggcacc
cacctcaccggcctgcgtgcagcgatgacccgcgtcatcaacaaatacatcgacgaatcc
gaactggccaagaaggccaaggtggaagtgtccggcgacgacatgcgtgaaggcctgacc
tgcgtgctcagcgtcaaggtgcccgaacccaagttctccagccagaccaaggacaagctg
gtctccagcgaagtgcgtggtccggtggaagacatcgtgagcaagctgctggccgactat
ctgcaggagcgtcccaacgacgccaagatcattgtcggcaagatcatcgaggccgcgcgc
gcccgcgaagccgcacgcaaggcgcgcgacatgacgcgacgcaagggcgtgctcgacggc
atgggcctgcccggcaagctggcggactgccaggaaaaagacccggccatgtgcgaaatc
tatatcgtcgagggtgactccgccggtggctccgccaagcagggccgtgaccgcaagttc
caggcgatcctgccgctgcgcggcaagattttgaatgtggaaaaagctcgctacgaaaag
ctgctgaccagcaatgaaattctcacgctgatcaccgccttgggtaccggcatcggcaag
gccggtggcagcactggcaacgacgatttcaacgttgccaaactgcgctaccaccgcatc
atcatcatgaccgacgccgacgttgacggcgcccacatccgcaccctgctgctgaccttc
ttctaccgccagatgcccgagctggtggaacgcggccacatctacatcgcgcagccgccg
ctgtacaaggtcaaggccggtaaggaagagctctatctgcaaggccccagcgaactcgac
agcttcctgctgcgcattgcactggtcaacgcatcggtctataccggcggccccaacggc
accacgctgagcggcgacacgttggccgagcttgcacgcaagcaccaggtggcgcagagc
gtgattgcgcgcctgcaaaacttcatggatgccgaagccctgcgctcggtggccgatggc
gttgcgctcaatctggacaccgtagccgacgccgaagcctcagccgctgctctgcaggcc
aagctgcccgacgccgaagtagcgggcgagtttgacgtgcgcaccgacaaacccattctg
cgcatcagccgccgccaccacggcaatgtgaagagcagcgtgctcacacaggacttcgtg
cacggcgccgactaccacgccttggccgatgcggccaacaccttcaagggcttgctgtcc
gaaggcgcacgcgtcatgcgcggtgagggcgagcgccagaaggaagaaaaggtcaacgac
ttccgcgaagccatggcctggttgatcggtcaggccgagagctccaccagccgccagcgc
tacaaaggcttgggagaaatgaaccccagccagctctgggaaaccaccatggaccccacc
gtgcgccgcctgctacgcgtacagatcgacgacgccatcgaagccgatcgcgtgttcacc
atgctcatgggcgatgaagtggagccgcgccgcgacttcattgaaaccaatgcgctgagg
gcgggcaatattgacgtttga
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