Rhodoferax sp. GW822-FHT02A01: AAGF34_09895
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Entry
AAGF34_09895 CDS
T11686
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhog Rhodoferax sp. GW822-FHT02A01
Pathway
rhog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AAGF34_09895 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhog03021
]
AAGF34_09895 (rpoA)
03400 DNA repair and recombination proteins [BR:
rhog03400
]
AAGF34_09895 (rpoA)
Enzymes [BR:
rhog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AAGF34_09895 (rpoA)
Transcription machinery [BR:
rhog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AAGF34_09895 (rpoA)
DNA repair and recombination proteins [BR:
rhog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AAGF34_09895 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XAF51432
LinkDB
All DBs
Position
2088253..2089242
Genome browser
AA seq
329 aa
AA seq
DB search
MQNSLLKPKSISVEQLGTNRAKVALEPFERGYGHTLGNALRRVLLSSMPGFAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNREEVTLSLRKDSEGVVTAADIQTPHDVEI
INPGHVIANLSHGGKLDMQIKVEKGRGYVPGTMRRHADEPNKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAVSAEDAVRASAKILVEQLAVFAQLEGSELAAFDA
PAPRGNTQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSL
NEIKEVLASRGLTLGMKLESWPPAALEKR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtttgctgaaaccaaaatccattagcgtagaacagctcggtacgaaccgt
gccaaggtggccctggagccctttgagcgtggttacggtcacaccttgggcaatgcgctg
cgtcgcgtgttgctgtcgtccatgcccggatttgcagcaaccgaagtcaccatcgctggc
gtgctccacgagtactcctccattgatggcgtccaggaagacgtggtcaacatcctgttg
aacctcaagggtgtggtgttcaagctgcacaaccgcgaagaagtgacactgagcctgcgt
aaggactccgaaggtgttgtgactgcggccgatatccagactcctcatgacgtggaaatc
atcaaccccggtcatgtcattgccaatctgtcgcatggcggcaaactggacatgcagatc
aaggttgaaaagggtcgtggctacgtgcctggaaccatgcgccgtcatgctgacgaaccc
aacaagtccatcggccgtatcgtgctggatgcgtcgttctctccggtcaagcgtgtcagc
tataccgtggaaagcgctcgcgtcgaacaacgtaccgatctggacaagctggtggttgag
atcgaaaccaacggcgccgtgtctgctgaagacgcagtgcgcgcatcggccaagattctg
gtcgagcagttggctgtatttgcacagctcgaaggtagcgagttggctgcattcgatgcg
cctgccccgcgtggcaatacgcagttcgatcctatcctgctgcgtccagtggacgagttg
gagttgacagttcgttctgccaactgcctgaaggccgagaacatctactacatcggtgac
ctgattcagcgtaccgaaaatgagttgctcaagacccctaatctgggtcgcaagtcgctc
aatgaaatcaaggaagtgttggcttcccgcggtttgactttgggcatgaagctcgaaagc
tggccgcccgctgcactggaaaaacgctaa
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