Rhodoferax sp. GW822-FHT02A01: AAGF34_21105
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Entry
AAGF34_21105 CDS
T11686
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
rhog Rhodoferax sp. GW822-FHT02A01
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
5_3_exonuc
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
XAF48657
LinkDB
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Position
complement(4453695..4455791)
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AA seq
698 aa
AA seq
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MANLDLFATNPDEAQDRSRLDALRAQLHTLAHQYYVLDAPTVPDAEYDRLFRELQALEAA
HPDWLTPDSPTQRVGGKPLDQFASVRHAVPMLSIRTETDTESTGAEAFDARVRKELELVE
GDPAVEYVAELKFDGLAINLRYESGVLLQAATRGDGENGEDVTQNIRTIGQIPLRLPAVV
PQVLEVRGEVYMRRDDFEALNERQREKGEKTFVNPRNAAAGAVRQLDPGIAAQRPLSFFA
YGLGEVTPAEQGGPAFATHYGMLQTLKSWGFPVAAQVEVAHGASALIAYHQRIARERDQL
PYDIDGVVYKVNSLALQRQLGFVTREPRWAVAHKYPAQEEITKVLGIDVQVGRTGKLTPV
ARLEPVFVGGTTVSNATLHNLFEVRKKEVRVGDSVIVRRAGDVIPEVVGKVQSVLNPEPF
RHYPRSPYVPNFRMPTKCPICGSDVVREKGEANHRCTGGLFCSAQRKQAILHFAQRRAVE
VEGLGEKLVDQLVESNVVRTLPDLYKLGLTTLAALERMADKSAQNIVDALEKSKQTTLPR
FLFGLGIRHVGEATAKELARHFGSLDAIMDASEEVLLQVSDVGPIVAKSIRTFFDQAHNR
EVVEQLRACGIHWEEGAPTSDTPKPLAGKTFVLTGTLPTLGRDAAKDLIEAAGGKVSGSV
SKKTHFVVAGTEAGSKLDKANELGVTVLDEAALLEMLK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctggacttgtttgcaacaaacccggacgaggcccaggatcggtctcggctg
gatgcactgcgcgcacagttgcacacgctggcgcaccagtactacgtgctggacgcgccc
acggtacccgatgcggaatacgaccgcttgttccgggagttgcaggcgcttgaagcagcg
caccccgactggctgacaccagactctcccacccagcgtgtgggtggcaagcccttggac
cagtttgcatcggtgcgccacgccgtgcccatgctgagcatccgcaccgagaccgatacc
gaatccaccggcgccgaggcgtttgacgcccgggtgcgcaaggagcttgagctagtcgag
ggcgacccggccgtggagtacgtggccgagctgaagtttgacggcctggccatcaatctg
cgctacgaaagcggcgtactgttgcaagcggccacgcgcggtgacggcgaaaacggcgaa
gacgtgacacagaacatccgcaccatcgggcagatcccgctgcggctgccagctgtggtg
ccgcaggtactggaggtgcgcggcgaggtttatatgcgccgggatgactttgaagcgttg
aacgaacgtcagcgtgagaagggcgaaaagaccttcgtcaatccgcgcaatgctgcagcc
ggtgccgtgcgccagctggaccctggcatagctgcacaaaggcctttgagtttttttgcg
tatggccttggcgaagtgacaccagcagagcaaggtggccccgcctttgccacccattac
ggcatgttgcagacactgaagtcgtggggctttccggttgcggcacaagtggaagttgcg
cacggcgcgtctgctttgattgcctatcaccagcgtatagcgcgtgaacgtgatcaactg
ccgtatgacattgatggcgtggtctataaggtcaacagcctggcattgcagcggcagctc
gggtttgttacccgagaaccacgttgggcagtggcccacaaatatccggcgcaggaggag
atcaccaaggtattgggcattgatgtgcaggtggggcgcaccggcaagctcacgcctgtg
gcgcgactggagcctgtttttgtcggtggaaccaccgtgtccaacgccacactgcacaac
ctgtttgaggtgcgcaagaaagaagttcgtgttggggattcggtgatcgtgaggcgtgcg
ggcgacgtaatccccgaagtggtggggaaggttcaaagtgttttgaacccggaaccattc
aggcactatccgcgaagcccctatgtgcccaattttcgcatgcccaccaaatgccccatt
tgtggaagcgatgtcgtgcgcgaaaagggagaggcaaaccatcgctgcacgggcgggctc
ttctgcagtgcccaacgcaagcaggcgatattgcactttgcccagcgccgtgccgttgaa
gttgaaggtctgggcgaaaagttggtggatcaattggtagaaagcaatgtggtccgcacg
ttgccggatttgtacaagctcggcctgacgacgctcgctgcgctggagcggatggcagac
aaatccgcccaaaacatcgtagacgcgctggaaaaatccaagcagaccaccttgccgcgc
tttctgttcgggctgggcattcgacatgtaggagaggccactgccaaggaactggcgcgc
cactttggctcgctggacgccatcatggacgccagcgaagaagtcctgttgcaggtcagc
gatgtggggcccatcgtggccaagagcatacgtaccttttttgaccaggcgcacaaccgc
gaagtggtcgaacagctgcgcgcctgcggcatccattgggaagagggcgcgcctacgtcc
gacacgcccaagccgctggcgggcaagacctttgtgttgactggcaccttgcctacgctg
ggccgcgatgccgccaaggatctgatcgaggcggccggtggcaaggtctccggctcggtc
agcaagaagacgcattttgtggtcgcaggcaccgaggcgggcagcaagctcgacaaggcc
aatgaattaggtgttaccgtactggatgaagccgctttgctggagatgctgaaatga
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