Rhodoferax sp. GW822-FHT02A01: AAGF34_22525
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Entry
AAGF34_22525 CDS
T11686
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rhog
Rhodoferax sp. GW822-FHT02A01
Pathway
rhog02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhog00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AAGF34_22525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhog02000
]
AAGF34_22525
Transporters [BR:
rhog02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AAGF34_22525
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GFIT
Motif
Pfam:
BPD_transp_1
DUF8413
Toxin_trans_Wo
Motif
Other DBs
NCBI-ProteinID:
XAF48921
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Position
4746163..4747401
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AA seq
412 aa
AA seq
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MTAAALSPVSLATKLARVERRKRLRSMALTLPLLVFLALTFLVPLGALLIRAVENPEVAD
SLVQTGKALSGWDRKAAPPDEAYQALVSDLAAIPETAQAGVLARRLNSEVSGARSLIMST
YRAKLDVEGLSAAQVKDKLIAQDARWGELPYWWAIAKNSSRWTPDYLLTSLDLKRDAQGS
IVRVGAEEAAFSDILLRTFSISAVVTLICILIGYPLAYWLSTLSERRANLMMILVLLPFW
TSVLVRIAAWIVLLQSNGLVNRFLMFSGLTDGPVPLLFNRLGVVIAMVHILLPFMILPLY
SVMKSVPANYVRAAVSLGSAPLAAFFRIYVPQTYPGVAAGGLLVFITAIGYYVTPALLGG
AGDQMLSYYVAQYTNVEVNWGMACALGSVLLITTLALYAVYRRFGKAELSLG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagcagcgctttcaccggtgtccctggccaccaaactggcccgggttgaacga
cgcaagcgcttgcgttccatggccctgaccctgcccttgctggtgttcctggcgctcacc
tttctggtgccgctgggagcactgctgatccgcgcagtggagaacccggaggtcgcagac
agcctggtgcaaaccggcaaggccctgtcgggctgggaccgcaaggccgctccaccggac
gaggcctaccaagcgcttgtcagtgacctcgccgccatccccgaaaccgcacaggccggt
gtgttggcgcgcagactcaattcggaagtgagcggtgcacgctcgctcatcatgagcacc
taccgtgccaagctggacgtggaaggcctgagcgcagcgcaggtgaaggacaaactgatt
gcgcaggacgcccgctggggcgaactcccctactggtgggccattgccaagaacagttca
cgctggacgcccgactatctgctgacctcgctggacctcaagcgcgatgcgcaaggctcc
atcgtgcgggtgggtgccgaagaagcggccttcagcgacatcctgctgcgcaccttctcc
atcagcgccgtcgtcacactgatctgcatactcattggatatccactggcctattggctc
tccacattgagcgagcgccgtgccaacctgatgatgattttggtgctgctgcccttctgg
acttcggtgctggtgcgcattgctgcctggatcgtgctgctgcaaagcaacggactggtg
aaccgtttcctgatgttctcaggcctgaccgacggccctgtgcctttgctgttcaaccgc
ctgggcgtggtgatcgccatggtgcacatcctgctgcccttcatgatcctgccgctatac
agcgtgatgaagtcggtgcccgccaattacgtgcgcgccgccgtatccctgggcagtgcg
ccgctggccgcgttcttccgcatctacgtgccgcagacctaccctggcgtggccgcgggc
ggcctgctggtgttcatcacggccattggctactacgtcacccctgccttgctcggtggt
gccggtgaccagatgctgagctactacgtggcccagtacaccaatgtagaagtcaactgg
ggtatggcctgcgcactgggttcggtgctgctgatcaccacgctggccctgtacgcggtg
taccgccgctttggcaaggccgaactcagcctgggataa
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