Rhodococcus sp. H-CA8f: CPI83_00085
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Entry
CPI83_00085 CDS
T10533
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhoh Rhodococcus sp. H-CA8f
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoh03032
]
CPI83_00085 (gyrB)
03400 DNA repair and recombination proteins [BR:
rhoh03400
]
CPI83_00085 (gyrB)
Enzymes [BR:
rhoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CPI83_00085 (gyrB)
DNA replication proteins [BR:
rhoh03032
]
Prokaryotic type
DNA Topoisomerases
CPI83_00085 (gyrB)
DNA repair and recombination proteins [BR:
rhoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPI83_00085 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
DUF2570
Motif
Other DBs
NCBI-ProteinID:
ATI30595
LinkDB
All DBs
Position
complement(18158..20194)
Genome browser
AA seq
678 aa
AA seq
DB search
MAAQKSDTSTSSKDYNASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA
MAGHATKVEVTLLEDGGIRVIDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDSYAVS
GGLHGVGISVVNALSTRLDVDIKVDGYRWQQTYTDSKPGELVQGDPTKETGTTVSFWADP
EIFETTRYNFETVARRLQEMAFLNKGLTITLTDERAEVIDDEAAEVAEAPKSAAEEAEEA
AQAAPRKSKTRIYHYPGGLEDYVRHINKSKTPIHNSVVGFTAKGTGHELEVAMQWNSGYS
ESVHTFANTINTHEGGTHEEGFRAALTATVNKYALEKKLLKDKDPKLTGDDIREGLAAII
SVKVGEPQFEGQTKTKLGNTEVKSFVQKACNEHLAHWFEANPADAKTIVNKAVSSAQARV
AARKARELVRRKSATDLGGLPGKLADCRSNDPEKSEIYIVEGDSAGGSAKSGRDSMYQAI
LPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADVDGQ
HIATLLLTLLFRFMRPLVEHGKVYLAQPPLYKLKWQKGAQPEFAYSDRERDAMVKAGLES
GKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLRLVTLDDAAAADELFSVLMGEDVE
ARRSFITRNARDVRFLDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcagatacaagcacttccagcaaggactacaacgcgtcgtccatc
accgtcctcgaaggactcgaggcggtacgtaagcgtccaggcatgtacatcggttccacc
ggtgaacgcggcttgcaccacctcatttgggaggtcgtcgacaactcggtcgacgaggcg
atggccggacacgccaccaaggtcgaggtcaccctcctcgaagacggcggaatccgcgtc
atcgacgacggccgtggcatcccggtcggcatgcacgcctccggagttcccaccgtcgag
gtcgtgctgacccagctgcacgccggcggcaagttcgactccgactcctacgccgtctcc
ggtggtctgcacggcgtcggtatctcggtggtcaacgcgctctccacccggctcgacgtc
gacatcaaggtcgacggctaccggtggcagcagacgtacaccgattccaagccgggagag
ctcgtacagggcgacccgacgaaggagaccggcaccaccgtcagtttctgggctgatccc
gagatcttcgagaccacccgctacaacttcgagaccgttgcgcgtcgtctgcaggaaatg
gccttcctcaacaagggcctgaccatcacgctgaccgacgagcgcgccgaggtcatcgac
gacgaagccgccgaggtagccgaggctcccaagtctgctgccgaagaagccgaagaagct
gctcaggcagcgccgcgtaagtccaagacccgtatctaccactaccccggtggactcgag
gactacgtccggcacatcaacaagagcaagaccccgatccacaactcggtcgtgggattc
accgccaagggcaccggccacgagctcgaggtcgcaatgcagtggaactccggctactcg
gagtccgtgcacaccttcgccaacacgatcaacacccacgagggtggtacccacgaagag
ggcttccgcgccgcactgaccgcaacggtcaacaagtacgcgctcgaaaagaagctgctc
aaggacaaggatcccaagctcaccggtgacgacatccgtgaaggacttgcggccatcatc
tcggtgaaggtcggtgaaccccagttcgagggtcagaccaagaccaagctcggcaacacc
gaggtcaagtccttcgtacagaaggcgtgcaacgagcacctcgcgcactggttcgaggcg
aaccccgccgacgcgaaaaccattgtgaacaaggctgtttcgtcggcgcaggcccgcgtc
gccgcacgtaaggcgcgtgagctggtccgtcgcaagagtgcgaccgacctcggtggcctg
ccaggcaagctcgccgattgccgctccaacgatccggagaagtccgagatctacatcgtg
gagggcgactccgcaggcggctcggccaagtccggccgagactcgatgtaccaggcgatc
ctcccgcttcgcggaaagatcatcaacgtcgagaaggcgcgtatcgatcgcgtcctcaag
aacaccgaagtccagtcgatcatcaccgcgttcggcacgggcatccacgacgagttcgac
atcgccaagctgcgctatcacaagatcgtgctcatggccgacgccgacgtcgacggtcag
cacatcgcaacgctgctgctcacgctgctgttccgcttcatgcggccgctcgtcgagcac
ggcaaggtctacctcgcgcagccgccgctgtacaagctcaagtggcagaagggtgcgcag
ccggaattcgcgtactccgaccgcgagcgcgacgcgatggtcaaggcaggcctcgagtcc
ggcaagaagatcaacaaggacgacggcatccagcgctacaaaggcctcggcgagatgaac
gccaaggagctgtgggaaaccacgatggacccgacggtgcgcgttctgcgtctcgtcacg
ctcgacgacgcggctgctgccgacgagctgttcagcgtgctgatgggcgaagacgtcgaa
gcacgacgcagcttcatcacccgcaatgcccgggacgttcgtttcctcgacgtgtag
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