Rhodococcus sp. H-CA8f: CPI83_02740
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Entry
CPI83_02740 CDS
T10533
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhoh Rhodococcus sp. H-CA8f
Pathway
rhoh00061
Fatty acid biosynthesis
rhoh00071
Fatty acid degradation
rhoh01100
Metabolic pathways
rhoh01212
Fatty acid metabolism
rhoh02024
Quorum sensing
rhoh04146
Peroxisome
Module
rhoh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhoh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CPI83_02740
00071 Fatty acid degradation
CPI83_02740
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CPI83_02740
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPI83_02740
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhoh01004
]
CPI83_02740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhoh04147
]
CPI83_02740
Enzymes [BR:
rhoh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CPI83_02740
Lipid biosynthesis proteins [BR:
rhoh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CPI83_02740
Exosome [BR:
rhoh04147
]
Exosomal proteins
Exosomal proteins of breast milk
CPI83_02740
Exosomal proteins of breast cancer cells
CPI83_02740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
ATI31065
LinkDB
All DBs
Position
complement(588924..590444)
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AA seq
506 aa
AA seq
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MVSVLDPVTRHAEVTPDNIAIRNSIAIRGTDEHWTYRQLHDASLAFAGRIRDAGLSVGDR
VLLAAPSVAEFVVAYMGIQAAGCVVVPINTMSAQPEVEYVLDDAEISLAIAWHQLGPAVQ
DAGSARGVPVWTLTEESAKADHAPATVVDREATDTTAILYTSGTTGRPKGAQLTVGNLLS
AGEIGAESSRGNPSDRTGTGLPLFHIFGQGSVMMATFTGGGSLSLLARFDPAAMLDLVRR
DKLTIMAGVPTMWNAMLHAAADVDSSDFEQLRIAISGGASLPGEVARAFEARFNCTILEG
YGLTETSAFGTFNSIDRVAKIGYTGRAVPRTEVEVRDHDGNVCEAGTVGEVFIKGPTVMK
GYWKRPEDTAAVLSDDGWFRTGDLGETDPDGDLRIVDRVKDLIIRGGYNVYPGEVEEVLY
QHPDIIEAAVIGIPDDYYGEEVAAVVAVRPGSDLEADAVTSWARERLSAYKIPRVVQFID
ALPKGSTGKILKRSIDRTELLAQKQN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttagcgttctcgacccggtgacccgtcacgcggaagtcacaccggacaacatcgca
attcgaaacagcattgcgatccgcggcacggatgaacactggacttaccggcagctccac
gacgcatccctggcgttcgccggccgcattcgcgacgccgggttgagcgtaggcgatcgg
gttctcctagcggcaccgtcggtagcggaattcgtcgtggcgtacatgggaattcaggcc
gcaggttgtgtcgtggtaccgatcaacacgatgtcggcgcaacccgaagtcgagtacgtt
ctggacgacgcggagatttccctggccatcgcgtggcatcagctcggtcccgcagtccag
gatgcagggagcgcgcgcggcgtcccggtgtggacactcaccgaagagtcggcgaaggcc
gatcatgcacccgcaactgtggtcgaccgtgaagcaacagacaccacggcgattctctat
acctccggcaccaccggacgcccgaagggcgctcagctgaccgtcgggaatttgttgtcc
gccggtgagatcggcgccgagagcagccgcggaaacccctcggaccgcaccggaaccgga
ctgccgctctttcacatcttcggccagggttcggtcatgatggcaaccttcaccggcggc
ggatcactgtccctgctcgcccggttcgaccccgctgccatgctcgacctggtccgccgg
gacaagctcaccatcatggccggtgtccccaccatgtggaatgccatgctgcacgccgcc
gccgatgtggacagctccgacttcgaacaactcaggatcgcaatctccggtggcgcatca
cttcccggtgaagtcgctcgtgccttcgaagcacggttcaactgcacgatcctcgagggc
tacggcctcaccgagacgagcgcgttcgggacattcaacagcatcgaccgcgtcgcaaag
atcggatacaccggccgcgccgtaccgcgcaccgaggtcgaggtgcgtgatcacgacgga
aatgtttgcgaggcaggcacagtgggcgaggtgttcatcaaaggaccgacggtcatgaag
ggttactggaagcgccctgaagacactgccgccgttctttccgacgacggatggttccgc
accggagacctcggtgagaccgatcccgacggggaccttcgcatcgtcgaccgagtgaag
gacctcatcatccgtggtggatacaacgtctatccgggcgaggtcgaagaggtgctctac
cagcaccccgacatcatcgaagccgcagtgatcggcatacccgacgactactacggggag
gaagttgccgcagtggtggccgtgcgtccaggctccgacctcgaagcagacgccgtcact
tcgtgggctcgggaacgtctctccgcctacaagattccccgagtcgtccagttcatcgac
gcactcccgaagggttcgacgggaaagatcctcaagcgatcgatcgaccgaaccgaactc
ctcgcccagaagcagaactga
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